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View Structure Prediction Details

Protein: CG10362-PA
Organism: Drosophila melanogaster
Length: 1037 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG10362-PA.

Description E-value Query
Range
Subject
Range
gi|125982357, gi... - gi|54643390|gb|EAL32134.1| GA10273-PA [Drosophila pseudoobscura], gi|125982357|ref|XP_001355078.1| G...
454.0 [0..1] [1037..1]

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Predicted Domain #1
Region A:
Residues: [1-164]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIPISNILL LCLIFLLIGG VVMILLQYLI FIKFSNLPDE SEEQKQANAK YTLPLNIKQT  60
   61 ARNLKRLSNS GLGGGAGNGC ENHQESLRRA SALVSLNFVM QFLFHEFKNS NRVRKWFYRK 120
  121 LSIELDELIS KTTTGKLLDK LTIKELELGD QFPDVKSLSV HNVE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [165-513]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDKDEQRIEN LDLLLDINYV GNFTTSIDAD MVLGKKGSIT LRVKQLSGMA RLQFTRKPYT  60
   61 HWSISFLGDP ELILDIESKY QGRQMQSNIT NLISNQIRKA VRRKHTLPNY KLRYKPFFHW 120
  121 TAEEDASDCD IQPNGLLTVK LAELSRLMGY PGASETYCTI TLAPVPFIEA SQRDSRNVLI 180
  181 SLDVFIHKAK NQQIGIVFKQ SGSQVVRIES VLPNTPACKS NLLAGDVLVA IEGRPVTTIQ 240
  241 QIAKVVKTLQ ATVFSLRIER IIPGIIRNDA ILEDFEKYED IGDLPSSYPC QPKLETDEAA 300
  301 TADPTPKHLV VKPSLSGTPT NSPKKSNLIA KAIKKTMSRE SGDKDRDKD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.0
Match: 1ky9A
Description: Protease Do (DegP, HtrA), C-terminal domains; Protease Do (DegP, HtrA), catalytic domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.879220468838319 bayes_pls_golite062009
hydrolase activity 0.83105139693348 bayes_pls_golite062009
peptidase activity 0.81546887337164 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 0.5672666868164 bayes_pls_golite062009
serine hydrolase activity 0.50826037975448 bayes_pls_golite062009
serine-type peptidase activity 0.508252655710209 bayes_pls_golite062009
endopeptidase activity 0.264500844139819 bayes_pls_golite062009
serine-type endopeptidase activity 0.201782736081951 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [514-1037]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KDKDKDKDKD KDKDKDKDKD KDKDKGKEEV EEPVNYFYQH STIDCPFSPL IHMEDVCSFQ  60
   61 LDNSSRFLNV CVFGKSAGES VLLGYNNVQI GQILVECSET SLNQCLKQIS LNPASLQAVK 120
  121 THPLSNQSGF NPNLCFGDIL FGFSWMGNPN LTVGDVPIKS TSKSQSPARN PLAGDRVASE 180
  181 DQSQFLKLTS SMADSSTSGE SSSGTTAAPR AHDFVRTHFH RATQCDFCGK KIWLKDAMQC 240
  241 QECSMCCHKK CIVKCQMATV CGPVDCTGSI PATSSTPSMA SRPEFTITQA DNPQIVDSST 300
  301 GATPFDETSA ASGGDQGQIQ SPTASGLDVH RSSLTGMLAQ GIKRQASNLD IPGIVSSLTG 360
  361 SGQQVNSKSL PPSPQHTPSR KSSIVEEATP ALQQNPFESV TQHLEALPLD CPELSFEQVI 420
  421 VITEPIIRHT RNEDLMNLAK STSKLLYAAL PPDERVAKIN ELLTKLKVAL DAETEGYTLM 480
  481 NDAEKATESS PWKSDRSDER VQALSIIMLY LCTGLQHAQG VVLQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.69897
Match: 1xa6A
Description: Crystal Structure of the Human Beta2-Chimaerin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
enzyme activator activity 0.53004209819211 bayes_pls_golite062009
GTPase activator activity 0.528693496432149 bayes_pls_golite062009
binding 0.0980674097362609 bayes_pls_golite062009
Ras GTPase activator activity 0.0454578418356197 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle