| Protein: | pon-PA |
| Organism: | Drosophila melanogaster |
| Length: | 670 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pon-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
219.0 | [0..1] | [670..1] |
|
Region A: Residues: [1-189] |
1 11 21 31 41 51
| | | | | |
1 MLETKSIAAL AFTETPRKRK RETLYKNAAP PPNPQQQPPE KDAQDAAVAS TESCFTNAAF 60
61 SSTPKKLMVA RRRLAKENSQ PNPFPGLEVK SIADLAQKQQ HQQHHQQQQQ QQQKLPTNPF 120
121 EVLRQPPKKK KREHACFENP GLNLELPEKQ FNPYEVVRSA TTPAKGFVNP ALNLRGSDAP 180
181 ASLNPFEIH
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [190-350] |
1 11 21 31 41 51
| | | | | |
1 RPSEASEAAC NPSGVANPAL ADRDSEEQLP TSLKIGLPFT PTLGCRIDFH GMSLTQLTPS 60
61 KLLAEKLVFS PVPAPKRSLG AISEESSMDI GKELDRYQLE LENSINEAKL RKNGVLVDRE 120
121 LPRNSLEVEL PKNTKVSLVM ETNTQELMMQ EVVTVDTQVE R
|
| Detection Method: | |
| Confidence: | 5.09691 |
| Match: | 2h94A |
| Description: | No description for 2h94A was found. |
| Term | Confidence | Notes |
| binding | 1.95113868888523 | bayes_pls_golite062009 |
| transcription regulator activity | 1.67817541368103 | bayes_pls_golite062009 |
| DNA binding | 1.65628621585174 | bayes_pls_golite062009 |
| transcription factor activity | 1.2199858816759 | bayes_pls_golite062009 |
| nucleic acid binding | 1.06610635349341 | bayes_pls_golite062009 |
| protein binding | 0.853351196918381 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.79002371725751 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.492703104512863 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.42857545583097 | bayes_pls_golite062009 |
| transcription activator activity | 0.0621386040786331 | bayes_pls_golite062009 |
| actin binding | 0.0317334287062701 | bayes_pls_golite062009 |
|
Region A: Residues: [351-670] |
1 11 21 31 41 51
| | | | | |
1 RLVCTRRRTL TEISEASEVE EDTEKLLEQD REAEVILEQE KILEQEMVSE RERHLTREKQ 60
61 LKQEKLLERE KHLEREKLQE KLHEQLREKL QERAKHLEKE KLEEEELLER QLEEEREKEP 120
121 TDGDVAYASE SESDDEPDDL DFKAPARFVR AYRPAALPSK AASKESLQSI GSSKSAKSAE 180
181 VKPSIGMKGM IRKSIRRLMH PTSHTTPSEV KSEDKDEHGH GQGHGQHNIL NSIRHSLRRR 240
241 PQKAAELEEQ MEPVLADVSI IDTSERTMKL RSSVAQTEYM TIEQLTNEKK HSLRNSIRRS 300
301 TRDVLRHVFH KSHDAYATAK
|
| Detection Method: | |
| Confidence: | 17.30103 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
