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View Structure Prediction Details

Protein: CG16903-PA
Organism: Drosophila melanogaster
Length: 560 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG16903-PA.

Description E-value Query
Range
Subject
Range
gi|51513415, gi|... - gi|51513415|gb|AAH80491.1| Unknown (protein for MGC:89903) [Xenopus tropicalis], gi|223950615|ref|NP...
284.0 [0..3] [353..42]

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Predicted Domain #1
Region A:
Residues: [1-72]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATRGAGSTV VHTTVTALTV ETITNVLTTV TSFHSNSVNI SNNNSSSGAA PGADAAGGDA  60
   61 GGVAAAQADA NK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [73-343]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIYPRLFNRI VLTLENSLIP EGKIDVTPSS QDGLDHETEK DLRILGCELI QTAGILLRLP  60
   61 QVAMATGQVL FQRFFYSKSF VRHNMETVAM SCVCLASKIE EAPRRIRDVI NVFHHIKQVR 120
  121 AQKEISPMVL DPYYTNLKMQ VIKAERRVLK ELGFCVHVKH PHKLIVMYLQ VLQYEKHEKL 180
  181 MQLSWNFMND SLRTDVFMRY TPEAIACACI YLSARKLNIP LPNSPPWFGI FRVPMADITD 240
  241 ICYRVMELYM RSKPVVEKLE AAVDELKKRY I

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.045757
Match: 2i53A
Description: No description for 2i53A was found.

Predicted functions:

Term Confidence Notes
general RNA polymerase II transcription factor activity 8.12427628405368 bayes_pls_golite062009
cyclin-dependent protein kinase regulator activity 6.12919068656167 bayes_pls_golite062009
cyclin-dependent protein kinase activity 3.81462270101479 bayes_pls_golite062009
protein kinase regulator activity 2.90083336559452 bayes_pls_golite062009
kinase regulator activity 2.84789294954357 bayes_pls_golite062009
transcription regulator activity 2.795846725429 bayes_pls_golite062009
binding 2.4204867358489 bayes_pls_golite062009
nucleic acid binding 2.04886889839181 bayes_pls_golite062009
RNA polymerase II transcription factor activity 2.00665312545368 bayes_pls_golite062009
DNA binding 1.94297811210385 bayes_pls_golite062009
protein binding 1.47106731485576 bayes_pls_golite062009
kinase activity 1.38878672278174 bayes_pls_golite062009
transcription factor activity 1.21921365719206 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.13015830171495 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.12685411405053 bayes_pls_golite062009
protein kinase activity 0.957590284872001 bayes_pls_golite062009
transcription factor binding 0.749278791251235 bayes_pls_golite062009
enzyme regulator activity 0.729629809946521 bayes_pls_golite062009
protein serine/threonine kinase activity 0.567809158275482 bayes_pls_golite062009
transferase activity 0.532488713136535 bayes_pls_golite062009
kinase binding 0.451409627821468 bayes_pls_golite062009
enzyme binding 0.145967754156613 bayes_pls_golite062009
transcription coactivator activity 0.138191616709499 bayes_pls_golite062009
transcription activator activity 0.0696060248241566 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [344-560]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DARNKTKEAN TPPAVITVDR NNGSHNAWGG FIQRAIPLPL PSEKSPQKDS RSRSRSRTRT  60
   61 HSRTPRSRSP RSRSPSRERT KKTHRSRSSR SRSRSPPKHK KKSRHYSRSP TRSNSPHSKH 120
  121 RKSKSSRERS EYYSKKDRSG NPGSSNNLGD GDKYRNSVSN SGKHSRYSSS SSRRNSGGGG 180
  181 DGRSGGGGGG GGGGNGNHGS RGGHKHRDGD RSRDRKR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle