| Protein: | Ephrin-PC, Ephri... |
| Organism: | Drosophila melanogaster |
| Length: | 652 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ephrin-PC, Ephri....
| Description | E-value | Query Range |
Subject Range |
|
|
567.0 | [0..1] | [620..1] |
|
Region A: Residues: [1-210] |
1 11 21 31 41 51
| | | | | |
1 MQERSKQLRL TVSWTQSKSQ IHDSCQRRSM LACKRRLTTS KVLEDSHPPV AFPNCKSHRH 60
61 QQQKEKHKVQ LYSGKPLSIK LYVPGSIESI PKIRHKALTT TNKQQPAMHR KSKSKSKFQG 120
121 FNNLKPLYSP SKRQPPEKHS SVLVEAGIES KASRHFVGKK RIKNRNCLLS SPQPSPMRCK 180
181 MMIPFPKFGA TSFVTLLTLI CMETVLLSTM
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [211-336] |
1 11 21 31 41 51
| | | | | |
1 SSCAKTFYMH WNTSNSIFRI DNTDHIIDVN KGNLAFEFDQ VHIICPVYEP GTFENETEKY 60
61 IIYNVSKVEY ETCRITNADP RVIAICDKPQ KLMFFTITFR PFTPQPGGLE FLPGNDYYFI 120
121 STSSKD
|
| Detection Method: | |
| Confidence: | 45.522879 |
| Match: | 1ikoP |
| Description: | Ephrin-b2 ectodomain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ephrin receptor binding | 2.36859280211986 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.36323002598215 | bayes_pls_golite062009 |
| transporter activity | 2.349332206525 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.33073133834369 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.32480642400158 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.29776380543181 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 2.29241843776882 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 2.06651640066545 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 1.62698854419438 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 1.56305555927578 | bayes_pls_golite062009 |
| binding | 0.988564914693201 | bayes_pls_golite062009 |
| transmembrane-ephrin receptor activity | 0.986157912102199 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 0.63330965564582 | bayes_pls_golite062009 |
| ephrin receptor activity | 0.605684209141979 | bayes_pls_golite062009 |
| receptor activity | 0.536491030734287 | bayes_pls_golite062009 |
| receptor binding | 0.4653316685403 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.416025501184058 | bayes_pls_golite062009 |
| protein binding | 0.31459442397123 | bayes_pls_golite062009 |
| transmembrane receptor protein tyrosine kinase activity | 0.12460560872441 | bayes_pls_golite062009 |
|
Region A: Residues: [337-555] |
1 11 21 31 41 51
| | | | | |
1 DLYRRIGGRC STNNMKVVFK VCCAPEDNNK TTALSNSKSV TDTGGAINVN IANNDESHVN 60
61 SHGNNIAIGT NIGINGGQII GGPQSAGIPI NPLSGNNNIN GIPTTINSNI DQFNRIPIQP 120
121 NIIGNHVGTN AVGTGIVGGG GIILTPGHAH GNINMLQPGR GGINGAYPGH HHIQTGIRIN 180
181 NVPTQHNYPS HKGNANSNIN GNDDHHHYNK HPNEVVKNE
|
| Detection Method: | |
| Confidence: | 11.69897 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
|
Region A: Residues: [556-652] |
1 11 21 31 41 51
| | | | | |
1 ELTYNSGAAT SDGNIFALWI WILSIFPLLS IQSCHLSSYW ISASFLVSTI AILGIHYLIQ 60
61 ITLQTTVQRY SPGMVEITAT SMNGMFDQNA GTIEYDR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
