YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: Sirt7-PA
Organism: Drosophila melanogaster
Length: 771 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sirt7-PA.

Description E-value Query
Range
Subject
Range
gi|54638402, gi|... - gi|54638402|gb|EAL27804.1| GA10903-PA [Drosophila pseudoobscura], gi|125774823|ref|XP_001358663.1| G...
439.0 [0..21] [771..1]

Back

Predicted Domain #1
Region A:
Residues: [1-426]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKDLGEEKD QDQEQNTEME PKQEMDVAQS YITRAKMNPA KKDNEKRRRK DAMRRVSMIL  60
   61 RKCDSMRTTE DRQFLEKHPD MVKTTKKRKE RVEIYKERVV EREDAPHVIE AKVEQLANII 120
  121 SQAKHLVCYT GAGISTAALI PDYRGSQGIW TLLQKGQDIG EHDLSSANPT YTHMALYELH 180
  181 RRRLLHHVVS QNCDGLHLRS GLPRNSLSEI HGNMYVEVCK NCRPNSVYWR QFDTTEMTAR 240
  241 YCHKTHRLCH RCSEPLYDTI VHFGERGNVK WPLNWAGATA NAQRADVILC LGSSLKVLKK 300
  301 YTWLWQMDRP ARQRAKICVV NLQWTPKDAI ASIKINGKCD QVMAQLMHLL HIPVPVYTKE 360
  361 KDPIFAHASL LMPEELHTLT QPLLKNADEE EAFTTTTEET QDSTISSESC SFNYSDLPIG 420
  421 KGPRIR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.0
Match: 1j8fA
Description: Sirt2 histone deacetylase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.68732752141642 bayes_pls_golite062009
transcription regulator activity 1.39353160159826 bayes_pls_golite062009
NAD-dependent histone deacetylase activity 0.875291904235447 bayes_pls_golite062009
NAD-dependent protein deacetylase activity 0.875291904235447 bayes_pls_golite062009
catalytic activity 0.739210399081789 bayes_pls_golite062009
DNA binding 0.728790202227599 bayes_pls_golite062009
histone deacetylase activity 0.678257037571674 bayes_pls_golite062009
protein deacetylase activity 0.667574326888104 bayes_pls_golite062009
nucleic acid binding 0.620294268351623 bayes_pls_golite062009
protein binding 0.0198646008296066 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [427-564]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPIKNGRRVK TNLELRQKFK TLNGQDEEIK VEHVKTNGEV KTEKDLITLE SSIKIETEVK  60
   61 LEKLECSDTN FQQELKLLEL LPKLEPLSLK EETEETPSNG FPELPKLVAI QKTHAECLSA 120
  121 VPTESRLKPL QLPPLVPI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [565-690]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GAPLSTPFVE PKLVLPPASQ SSSIQIKSEG DGDSSTENDN EEEEESELAQ MDLLRQNNDE  60
   61 ELLRQLPTWY DAKYAYSGLH SILIPPPADL NIWNSQVVPN FAMNRSAASC FFCFDRYAEL 120
  121 ECQFYR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [691-771]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RWNLSQRKHK KRARSGRFVV CECCPTSDDD DDYDENISLA HIAAAETAKR RQQLSTSFPR  60
   61 KLARTQAGWY GKGYKKGRKR R

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle