| Protein: | CG5808-PA |
| Organism: | Drosophila melanogaster |
| Length: | 653 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG5808-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
291.0 | [0..1] | [414..1] |
|
Region A: Residues: [1-164] |
1 11 21 31 41 51
| | | | | |
1 MSVVIETTMG DLTVDLFISE RPIACLNFLK LCRLKYYNFN LFHTVQQGFI AQTGDPSGAG 60
61 DGGSSIWGVV EGPQKRFFEA EFLPKINHSS AGMLSLVSAG KNLVGSQFFL TLGENLTSLD 120
121 GNHCVIGEVV EGHEVLRKLN DAIVDDSFRP YQDIRITHTV VLED
|
| Detection Method: |  |
| Confidence: | 66.09691 |
| Match: | 1xyhA |
| Description: | Crystal Structure of Recombinant Human Cyclophilin J |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidyl-prolyl cis-trans isomerase activity | 3.73853378771688 | bayes_pls_golite062009 |
| cis-trans isomerase activity | 3.66963215732405 | bayes_pls_golite062009 |
| isomerase activity | 1.96529188741504 | bayes_pls_golite062009 |
| binding | 1.46018233647024 | bayes_pls_golite062009 |
| unfolded protein binding | 1.38124355054041 | bayes_pls_golite062009 |
| catalytic activity | 0.748655649755714 | bayes_pls_golite062009 |
| nucleic acid binding | 0.426463143591006 | bayes_pls_golite062009 |
| protein binding | 0.130251391659493 | bayes_pls_golite062009 |
|
Region A: Residues: [165-324] |
1 11 21 31 41 51
| | | | | |
1 PFPNPRGLQA PSRSPSPSAE RLKNGRIAAD EDIDDTDGMT AEEMQEMLAE REAKARATIL 60
61 EIVGDLPDAD MAPPENVLFV CKLNPVTTDD DLEIIFSSFG VLKGCEVIRD RKTGDSLQYA 120
121 FVEFEDQKSC EAAYFKMDNV LIDDRRIHVD FSQSVSKVTW
|
| Detection Method: | |
| Confidence: | 4.45 |
| Match: | 1fnxH |
| Description: | Hu antigen C (Huc) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 3.28185713569553 | bayes_pls_golite062009 |
| nucleic acid binding | 3.0372165500396 | bayes_pls_golite062009 |
| RNA binding | 2.06552837244801 | bayes_pls_golite062009 |
| protein binding | 0.958228859356026 | bayes_pls_golite062009 |
| mRNA binding | 0.880500251455587 | bayes_pls_golite062009 |
| transcription regulator activity | 0.258874009112248 | bayes_pls_golite062009 |
| DNA binding | 0.208935674354032 | bayes_pls_golite062009 |
|
Region A: Residues: [325-471] |
1 11 21 31 41 51
| | | | | |
1 RGKGRGIEGD YRKLDFNNLR DDKDHRKPNN GRSRTEDHKE RNRTEDFRNR MSSAERRKAR 60
61 EQRHQEQSER DVRKNLQRRT RSKEKDEKSV YRSKKSQNES VRENSNRERN RNEKRSSRSR 120
121 DATHRRYSRS RDREERRPSR PRDQLGR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [472-653] |
1 11 21 31 41 51
| | | | | |
1 RSRSRDQKER RRSRPREQNE RRRSRSRDQT GKRPTQNRDR NDSRRFHSPQ EGRRNDERSH 60
61 RETSRNQRRS PERRQQSRNR EDHRMDTHSS PNKSHEKKRK LSVEKSKKQA KKSKRAASSS 120
121 SDSSESSSES ESDSTSSDSS EDSSSSSSSS DDRSKRKKST KSKQKKSKSK SSHKSKKKHN 180
181 RN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
