Protein: | pnt-PC |
Organism: | Drosophila melanogaster |
Length: | 623 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pnt-PC.
Description | E-value | Query Range |
Subject Range |
|
258.0 | [0..303] | [622..144] |
Region A: Residues: [1-92] |
1 11 21 31 41 51 | | | | | | 1 MPPSAFLVNA SIISAANALD SDKEQQLQEH LNQSHFTSSS SSSNSSNNNN CHTAPNYNMV 60 61 LQSYENYPSY HLAQHHHHHH HHHSHPHHQL AQ |
Detection Method: | ![]() |
Confidence: | 1.16 |
Match: | 2odjA |
Description: | No description for 2odjA was found. |
Region A: Residues: [93-175] |
1 11 21 31 41 51 | | | | | | 1 QTGLHSHHTM QQQLQQQQQS LLLQHPQQQQ QQHSHQSQQQ QQHGYGSSAQ LPHHRLSGGS 60 61 TGSTTTTSSG SSSSGSSSSA SSQ |
Detection Method: | ![]() |
Confidence: | 1.24 |
Match: | 2apoA |
Description: | Crystal Structure of the Methanococcus jannaschii Cbf5 Nop10 Complex |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [176-357] |
1 11 21 31 41 51 | | | | | | 1 GFANGSATAN NLVGALSSST AASLGLGYFN DMAPFVGDAN AYYTDSDVNF FSSGYNTSNT 60 61 HDRINNSTPP QQQQSQQPTV NGSGSASSNN NNSMLPPAVQ QSNNENNNTS SSNTNNSSNN 120 121 NNNSGGSNNS NAGSNNNNNN NNNINFMAAA AIFQHHLKEE PGTQNGNIGG YGGGSNSQND 180 181 PT |
Detection Method: | ![]() |
Confidence: | 6.30103 |
Match: | 1deqA |
Description: | Fibrinogen |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [358-446] |
1 11 21 31 41 51 | | | | | | 1 DLSSYGLPAH LAAYGGGSGS GPTGGRSSGG GGDESDYHST ISAQDHQSQQ SSGGNGSGGA 60 61 SGGSTGNSNG YLDSSSEFYG SYAGRNRFH |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [447-623] |
1 11 21 31 41 51 | | | | | | 1 DGYPPEFTPY DAQSFQSMGP QPTAMDQWGA AHAHQHPAAY MSTLGLDKGL LGGYTTQGGV 60 61 PCFTGSGPIQ LWQFLLELLL DKTCQSFISW TGDGWEFKLT DPDEVARRWG IRKNKPKMNY 120 121 EKLSRGLRYY YDKNIIHKTA GKRYVYRFVC DLQNLVGHTP EELVAKYDLK IEKKDVD |
Detection Method: | ![]() |
Confidence: | 59.0 |
Match: | 1gvjA |
Description: | ETS-1 DNA BINDING AND AUTOINHIBITORY DOMAINS |
Matching Structure (courtesy of the PDB):![]() |
Term | Confidence | Notes |
transcription regulator activity | 5.55329976718261 | bayes_pls_golite062009 |
DNA binding | 5.08959163553491 | bayes_pls_golite062009 |
nucleic acid binding | 4.69183445184264 | bayes_pls_golite062009 |
transcription factor activity | 4.33152142980289 | bayes_pls_golite062009 |
binding | 3.52874320222492 | bayes_pls_golite062009 |
sequence-specific DNA binding | 2.48053910222825 | bayes_pls_golite062009 |
transcription activator activity | 2.37668609508629 | bayes_pls_golite062009 |
transcription repressor activity | 2.22485867684613 | bayes_pls_golite062009 |
RNA polymerase II transcription factor activity | 1.70025468248325 | bayes_pls_golite062009 |
transcription factor binding | 0.85714789329232 | bayes_pls_golite062009 |
protein binding | 0.753698599635855 | bayes_pls_golite062009 |
specific RNA polymerase II transcription factor activity | 0.0856082199488197 | bayes_pls_golite062009 |
specific transcriptional repressor activity | 0.0565989703351002 | bayes_pls_golite062009 |