| Protein: | Rpn7-PA |
| Organism: | Drosophila melanogaster |
| Length: | 389 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Rpn7-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
288.0 | [0..1] | [389..219] |
|
Region A: Residues: [1-276] |
1 11 21 31 41 51
| | | | | |
1 MPAENLEEQG LEKNPNLELA QTKFLLTLAE YKQDAALKAK LLEAIRTENM APWYEHICSE 60
61 LGWTVDKDLL ARMKENNRVE VEQLDAAIED AEKNLGEMEV REANLKKSEY LCRIGDKAAA 120
121 ETAFRKTYEK TVSLGHRLDI VFHLIRLGLF YLDHDLITRN IDKAKYLIEE GGDWDRRNRL 180
181 KVYQGVYSVA VRDFKAAATF FLDTVSTFTS YELMDYPTFV RYTVYVAMIA LPRNELRDKV 240
241 IKGSEIQEVL HGLPDVKQFL FSLYNCQYEN FYVHLA
|
| Detection Method: |  |
| Confidence: | 3.07 |
| Match: | 1qqeA |
| Description: | Vesicular transport protein sec17 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity | 2.802999698299 | bayes_pls_golite062009 |
| binding | 2.45002000313605 | bayes_pls_golite062009 |
| protein binding | 1.41340296563325 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.499034250223658 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.447205684237625 | bayes_pls_golite062009 |
| nucleic acid binding | 0.437277381081288 | bayes_pls_golite062009 |
| enzyme binding | 0.335436488591595 | bayes_pls_golite062009 |
| transcription regulator activity | 0.326419413972955 | bayes_pls_golite062009 |
| DNA binding | 0.186035324819401 | bayes_pls_golite062009 |
| signal sequence binding | 0.0263114188894915 | bayes_pls_golite062009 |
|
Region A: Residues: [277-389] |
1 11 21 31 41 51
| | | | | |
1 GVEKQLRLDY LIHPHYRYYV REMRILGYTQ LLESYRSLTL QYMAESFGVT VEYIDQELAR 60
61 FIAAGRLHAK VDRVGGIVET NRPDNKNWQY QATIKQGDLL LNRIQKLSRV INI
|
| Detection Method: | |
| Confidence: | 9.522879 |
| Match: | 1ufmA |
| Description: | Solution structure of the PCI domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.50995556050336 | bayes_pls_golite062009 |
| nucleic acid binding | 3.38144578566524 | bayes_pls_golite062009 |
| binding | 3.33026160538031 | bayes_pls_golite062009 |
| DNA binding | 3.30822066787723 | bayes_pls_golite062009 |
| transcription factor activity | 2.60537570879007 | bayes_pls_golite062009 |
| hydrolase activity | 2.30467124306022 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.32971938164691 | bayes_pls_golite062009 |
| transcription activator activity | 1.08566311616647 | bayes_pls_golite062009 |
| transcription repressor activity | 0.95491822926452 | bayes_pls_golite062009 |
| protein binding | 0.653872239015235 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.505349137311395 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.42135864069093 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.136726704233672 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.118016217031359 | bayes_pls_golite062009 |
