YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG6783-PB
Organism: Drosophila melanogaster
Length: 130 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6783-PB.

Description E-value Query
Range
Subject
Range
gi|114589486 - gi|114589486|ref|XP_001158395.1| PREDICTED: similar to Retinol-binding protein I, cellular (Cellular...
177.0 [0..1] [130..63]
FABPH_RAT - Fatty acid-binding protein, heart OS=Rattus norvegicus GN=Fabp3 PE=1 SV=2
165.0 [0..1] [129..1]
gi|51267 - gi|51267|emb|CAA33084.1| unnamed protein product [Mus musculus]
164.0 [0..1] [129..1]
gi|1869803, gi|4... - gi|48145851|emb|CAG33148.1| FABP3 [Homo sapiens], gi|1869803|emb|CAA71305.1| mammary-derived growth ...
164.0 [0..1] [129..1]
FABPH_ICTTR - Fatty acid-binding protein, heart OS=Ictidomys tridecemlineatus GN=FABP3 PE=2 SV=3
163.0 [0..1] [129..1]
FABPH_PIG - Fatty acid-binding protein, heart OS=Sus scrofa GN=FABP3 PE=2 SV=3
162.0 [0..1] [129..1]
FABP7_BOVIN - Fatty acid-binding protein, brain OS=Bos taurus GN=FABP7 PE=1 SV=2
162.0 [0..4] [129..5]

Back

Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFVGKKYKL DKSENFDEYM KELGVGLVTR KMGNSLSPTV EVTLEGDTYT LTTTSTFKTS  60
   61 AISFKLGVEF DEETLDGRNV KSIITLDGNK LTQEQKGDKP TTIVREFTDN ELITTLTIGN 120
  121 VKCVRVYKAV 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.0
Match: 2qm9A
Description: No description for 2qm9A was found.

Predicted functions:

Term Confidence Notes
long-chain fatty acid transporter activity 5.31242454679135 bayes_pls_golite062009
fatty acid transporter activity 5.05947161650978 bayes_pls_golite062009
lipid transporter activity 4.30505384117861 bayes_pls_golite062009
retinoid binding 3.86745158299736 bayes_pls_golite062009
isoprenoid binding 3.80802424204178 bayes_pls_golite062009
lysophospholipid transporter activity 3.53484598441971 bayes_pls_golite062009
retinol binding 3.41359399354212 bayes_pls_golite062009
binding 2.93830472620404 bayes_pls_golite062009
transcription regulator activity 2.27413749831465 bayes_pls_golite062009
transporter activity 2.15627660314839 bayes_pls_golite062009
transcription repressor activity 1.45696778890481 bayes_pls_golite062009
protein binding 1.23450129884619 bayes_pls_golite062009
prostaglandin-D synthase activity 1.18764036773412 bayes_pls_golite062009
lipid binding 1.0002255159651 bayes_pls_golite062009
retinol transporter activity 0.811095267558536 bayes_pls_golite062009
fatty acid binding 0.761923641769607 bayes_pls_golite062009
substrate-specific transporter activity 0.670647472301401 bayes_pls_golite062009
retinoic acid binding 0.539496110498594 bayes_pls_golite062009
intramolecular oxidoreductase activity 0.50851501669551 bayes_pls_golite062009
bile acid binding 0.37501307074598 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle