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View Structure Prediction Details

Protein: Sodh-2-PA
Organism: Drosophila melanogaster
Length: 360 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sodh-2-PA.

Description E-value Query
Range
Subject
Range
gi|238715026, gi... - gi|77958654|ref|ZP_00822684.1| COG1062: Zn-dependent alcohol dehydrogenases, class III [Yersinia ber...
330.0 [0..1] [359..3]

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Predicted Domain #1
Region A:
Residues: [1-360]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATDNLTAVL HGIEDLRLEQ RPIPEIADDE VLLAMDSVGI CGSDVHYLAH GRIGDFVLTK  60
   61 PMIIGHEAAG VVAKLGKKVT TLKVGDRVAI EPGVPCRYCD HCKQGRYNLC ADMVFCATPP 120
  121 YDGNLTRYYK HAADFCFKLP DHVSMEEGAL LEPLSVGVHA CRRAGVGLGS KVLILGAGPI 180
  181 GLVTLLAAQA MGASEILITD LVQQRLDVAK ELGATHTLLL QRDQSAEETV KVVHQTMSEV 240
  241 PDKSIDCCGA ESSARLAIFA TRSGGVVVVV GMGAPEVKLP LINALAREID IRGVFRYCND 300
  301 YSAALALVAS GKVNVKRLVT HHYDITETAE AFETSRRGTG GAIKVMIHVQ PRDANNKVKF 360
  361 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 85.0
Match: 1pl6A
Description: Human SDH/NADH/inhibitor complex
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ethanol binding 4.47659026306883 bayes_pls_golite062009
NAD or NADH binding 4.35058438816264 bayes_pls_golite062009
retinol dehydrogenase activity 4.1750549780559 bayes_pls_golite062009
L-iditol 2-dehydrogenase activity 3.00103406168296 bayes_pls_golite062009
alcohol binding 2.97042200128883 bayes_pls_golite062009
alcohol dehydrogenase (NAD) activity 2.94416173750168 bayes_pls_golite062009
retinol binding 2.89007863838685 bayes_pls_golite062009
all-trans retinal binding 2.84803957533249 bayes_pls_golite062009
alcohol dehydrogenase activity, zinc-dependent 2.26153457113968 bayes_pls_golite062009
NADPH:quinone reductase activity 2.16668841986245 bayes_pls_golite062009
benzaldehyde dehydrogenase activity 2.03039843216597 bayes_pls_golite062009
catalytic activity 1.79741889688267 bayes_pls_golite062009
oxidoreductase activity 1.69771604880532 bayes_pls_golite062009
retinoid binding 1.04593455330515 bayes_pls_golite062009
isoprenoid binding 0.93398178725124 bayes_pls_golite062009
S-(hydroxymethyl)glutathione dehydrogenase activity 0.779874038752102 bayes_pls_golite062009
chaperone binding 0.484522928331397 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 0.418775403210681 bayes_pls_golite062009
transmembrane transporter activity 0.418142370391682 bayes_pls_golite062009
L-arabinitol 2-dehydrogenase activity 0.382131941157781 bayes_pls_golite062009
3-hydroxyacyl-CoA dehydrogenase activity 0.36426941921419 bayes_pls_golite062009
glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity 0.361275519814065 bayes_pls_golite062009
coenzyme binding 0.35922330382799 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 0.32207755075663 bayes_pls_golite062009
3-alpha(17-beta)-hydroxysteroid dehydrogenase (NAD+) activity 0.320177384202291 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH 0.310712203379158 bayes_pls_golite062009
glyceraldehyde-3-phosphate dehydrogenase activity 0.298691872199351 bayes_pls_golite062009
ATPase activity 0.275256680720412 bayes_pls_golite062009
binding 0.144628283348863 bayes_pls_golite062009
fatty acid synthase activity 0.0962368786590111 bayes_pls_golite062009

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