| Protein: | tub-PC |
| Organism: | Drosophila melanogaster |
| Length: | 462 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tub-PC.
| Description | E-value | Query Range |
Subject Range |
|
|
394.0 | [0..1] | [462..1] |
|
Region A: Residues: [1-187] |
1 11 21 31 41 51
| | | | | |
1 MAYGWNGCGM GVQVNGSNGA IGLSSKYSRN TELRRVEDND IYRLAKILDE NSCWRKLMSI 60
61 IPKGMDVQAC SGAGCLNFPA EIKKGFKYTA QDVFQIDEAA NRLPPDQSKS QMMIDEWKTS 120
121 GKLNERPTVG VLLQLLVQAE LFSAADFVAL DFLNESTPAR PVDGPGALIS LELLEEEMEV 180
181 DNEGLSL
|
| Detection Method: |  |
| Confidence: | 78.69897 |
| Match: | 1d2zB |
| Description: | Tube death domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.81925838257497 | bayes_pls_golite062009 |
| protein binding | 2.45473206123776 | bayes_pls_golite062009 |
| transmembrane receptor activity | 1.66783807193588 | bayes_pls_golite062009 |
| receptor activity | 1.49139108045528 | bayes_pls_golite062009 |
| tumor necrosis factor binding | 0.568964907907048 | bayes_pls_golite062009 |
| death receptor activity | 0.402285252819743 | bayes_pls_golite062009 |
| tumor necrosis factor receptor activity | 0.201711780440556 | bayes_pls_golite062009 |
| signal transducer activity | 0.201651915574531 | bayes_pls_golite062009 |
| molecular transducer activity | 0.201651915574531 | bayes_pls_golite062009 |
| protein domain specific binding | 0.151782936408674 | bayes_pls_golite062009 |
| cytokine binding | 0.0519010687665362 | bayes_pls_golite062009 |
|
Region A: Residues: [188-462] |
1 11 21 31 41 51
| | | | | |
1 KYQSSTATLG ADAQGSVGLN LDNFEKDIVR RDKSVPQPSG NTPPIAPPRR QQRSTTNSNF 60
61 ATLTGTGTTS TTIPNVPNLT ILNPSEQIQE PVLQPRPMNI PDLSILISNS GDLRATVSDN 120
121 PSNRTSSTDP PNIPRITLLI DNSGDVNSRP NHAPAKASTA TTSTASSNNL PMISALNISK 180
181 GSRETLRPES RSSSSSLSKD DDDDNDGEED GEEEYPDAFL PNLSNSEQQS SNNDSSLTTV 240
241 TGTSGDNSFE LTNDSSSTSN DDYACNIPDL SELQQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
