| Protein: | gek-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1637 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gek-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
1027.0 | [0..34] | [1632..11] |
|
Region A: Residues: [1-427] |
1 11 21 31 41 51
| | | | | |
1 MEYESSEISD ITTGSCKKRL TFLKCILSDT TSDQKWAAEF GEDTEGHQFS LDYLLDTFIV 60
61 LYDECSNSSL RREKGVSDFL KLSKPFVHIV RKLRLSRDDF DILKIIGRGA FGEVCVVQMI 120
121 STEKVYAMKI LNKWEMLKRA ETACFREERD VLVFGDRQWI TNLHYAFQDN INLYLVMDYY 180
181 CGGDLLTLLS KFEDKLPEDM AKFYITEMIL AINSIHQIRY VHRDIKPDNV LLDKRGHVRL 240
241 ADFGSCLRLD KDGTVQSNVA VGTPDYISPE ILRAMEDGKG RYGTECDWWS LGVCMYEMLY 300
301 GETPFYAESL VETYGKIMNH QNCFNLPSQE TLNYKVSETS QDLLCKLICI PENRLGQNGI 360
361 QDFMDHPWFV GIDWKNIRQG PAPYVPEVSS PTDTSNFDVD DNDVRLTDSI PPSANPAFSG 420
421 FHLPFIG
|
| Detection Method: |  |
| Confidence: | 85.39794 |
| Match: | 2f2uA |
| Description: | No description for 2f2uA was found. |
|
Region A: Residues: [428-590] |
1 11 21 31 41 51
| | | | | |
1 FTFSLTSSST LDSKKNQSSG FGDDTLDTIS SPQLAILPSN NSETPVDSVQ LKALNDQLAA 60
61 LKQEKAELSK QHNEVFERLK TQDSELQDAI SQRNIAMMEY SEVTEKLSEL RNQKQKLSRQ 120
121 VRDKEEELDG AMQKNDSLRN ELRKSDKTRR ELELHIEDAV IEA
|
| Detection Method: | |
| Confidence: | 2.2 |
| Match: | 1jchA |
| Description: | Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [591-980] |
1 11 21 31 41 51
| | | | | |
1 AKEKKLREHA EDCCRQLQME LRKGSSSVET TMPLSISSEM SSYEIERLEL QFSEKLSHQQ 60
61 TRHNMELEAL REQFSELENA NLALTKELQQ TQERLKYTQM ESITDSAETL LELKKQHDLE 120
121 KSSWFEEKQR LSSEVNLKSK SLKELQAEDD EIFKELRMKR EAITLWERQM AEIIQWVSDE 180
181 KDARGYLQAL ATKMTEELEY LKHVGTFNNN GVDNKNWRNR RSQKLDKMEL LNLQSALQRE 240
241 IQAKNMISDE LSQTRSDLIS TQKEVRDYKK RYDSILHDFQ KKETELRDLQ KGGLEYSESF 300
301 LNKSTHHGLS SAFFRDMSKN SEIIDSAESF GNESGDNFTP NFFQSGNSGM LFNYEPKYAG 360
361 KNNKDHSSMK EASVSDLSRE ESDQLVKESQ
|
| Detection Method: | |
| Confidence: | 11.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [981-1051] |
1 11 21 31 41 51
| | | | | |
1 KKVPGNTAIH QFLVRTFSSP TKCNHCTSLM VGLTRQGVVC EICGFACHTI CCQKVPTTCP 60
61 VPMDQTKRPL G
|
| Detection Method: | |
| Confidence: | 3.03 |
| Match: | 1tbnA |
| Description: | NMR STRUCTURE OF A PROTEIN KINASE C-G PHORBOL-BINDING DOMAIN, MINIMIZED AVERAGE STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| general RNA polymerase II transcription factor activity | 3.46734661087649 | bayes_pls_golite062009 |
| transcription regulator activity | 2.82097223032126 | bayes_pls_golite062009 |
| binding | 2.71288992341677 | bayes_pls_golite062009 |
| GTPase regulator activity | 2.43859890356027 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 2.42148330229896 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 2.07238897772131 | bayes_pls_golite062009 |
| DNA binding | 2.05972958088217 | bayes_pls_golite062009 |
| kinase activity | 2.00903309297046 | bayes_pls_golite062009 |
| nucleic acid binding | 1.91592331431516 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.83466699022067 | bayes_pls_golite062009 |
| enzyme regulator activity | 1.78173505822139 | bayes_pls_golite062009 |
| guanyl-nucleotide exchange factor activity | 1.76217210688028 | bayes_pls_golite062009 |
| small GTPase regulator activity | 1.73820712435638 | bayes_pls_golite062009 |
| protein kinase activity | 1.61903873760762 | bayes_pls_golite062009 |
| transferase activity | 1.45394179515146 | bayes_pls_golite062009 |
| transcription factor activity | 1.38590948364516 | bayes_pls_golite062009 |
| signal transducer activity | 1.25050856744516 | bayes_pls_golite062009 |
| molecular transducer activity | 1.25050856744516 | bayes_pls_golite062009 |
| protein binding | 1.21002143294224 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.969266093401353 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.93378879973188 | bayes_pls_golite062009 |
| Ras GTPase activator activity | 0.854618067843974 | bayes_pls_golite062009 |
| Ras guanyl-nucleotide exchange factor activity | 0.716569837044966 | bayes_pls_golite062009 |
| GTPase activator activity | 0.531562206762648 | bayes_pls_golite062009 |
| kinase binding | 0.409606963040614 | bayes_pls_golite062009 |
| catalytic activity | 0.216721136299042 | bayes_pls_golite062009 |
| enzyme activator activity | 0.160536263083511 | bayes_pls_golite062009 |
|
Region A: Residues: [1052-1146] |
1 11 21 31 41 51
| | | | | |
1 IDPTRGIGTA YEGYVKVPKS GVIKRGWIRQ FVVVCDFKLF LYDISPDRCA LPSVSVSQVL 60
61 DMRDPEFSVG SVRESDVIHA AKKDVPCIFK IKTAL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1147-1301] |
1 11 21 31 41 51
| | | | | |
1 IDGGLSLNTL MLADNESEKS KWVIALGELH RILKRNSLPN TAIFKVNEIL DNTLSLIRNA 60
61 LCSVIIYPNQ ILLGTEDGLF YINLDQYEIA RIGESKKILQ LWYIEEEQIL VILCGKQRNL 120
121 RLLPIRALEA SDVEWIKVVE SKNCISACTG IIRRF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1302-1381] |
1 11 21 31 41 51
| | | | | |
1 PNIVYSFIIA LKRPNNHTQI VVYEINRTRT RHQKTCEFTI GYMAQHLQIL SDMRLVVAHQ 60
61 SGFTAYFLRG EATAMSLVHP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1382-1637] |
1 11 21 31 41 51
| | | | | |
1 ENQLCAFLNY SGVDAVRVIE ILCPSGGNFG EYLLVFQTLA IYVDLQGRKS RDREIMYPAF 60
61 PTYITFCDGH LLVFSDTHLD IFNTQTAEWV QSIGLKQSLP LNNLGNVVLS SVNDTPLIVY 120
121 LSNIHTKGLL QYRDGNRKGL PSIKRRFSIR EINKTIKSDR RSKMISAPTN FNHISHMGPG 180
181 DGIQNQRLLD LPTTLETADQ ACSPIIHSLS CIPQSRKSNF LEQVDANSDD YGNDNIISRT 240
241 PSPMASSFMD GLSNND
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
