| Protein: | Rrp4-PA, FBpp0309932 |
| Organism: | Drosophila melanogaster |
| Length: | 298 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Rrp4-PA, FBpp0309932.
| Description | E-value | Query Range |
Subject Range |
|
|
274.0 | [0..7] | [297..1] |
|
|
265.0 | [0..1] | [298..1] |
|
|
260.0 | [0..7] | [297..1] |
|
|
258.0 | [0..7] | [297..1] |
|
|
258.0 | [0..7] | [297..1] |
|
|
257.0 | [0..7] | [297..1] |
|
|
256.0 | [0..7] | [297..1] |
|
|
255.0 | [0..1] | [294..1] |
|
|
253.0 | [0..10] | [296..1] |
|
|
248.0 | [0..1] | [298..1] |
|
Region A: Residues: [1-298] |
1 11 21 31 41 51
| | | | | |
1 MSTNAAIDLA LDRVDWRDLA AQTEEQPRVY TPGEVLMPEA GFMRGHGTFV EDENIKSSVA 60
61 GVIQKVNKLI SVRPLKSRYV GEIGDVVVAR VSEVQQKRWR VDTNSRLDSI LLLSSVNLPG 120
121 GELRRRSAED EQMMRRYLDE GDLISAEVQN IFEEGSLSLY TRSLKYGKLS QGILVKVFPA 180
181 LVKRRKMHFH NLPCGASVIL GNNGYIWISP TKGQEEEGGE GGFAQNLNEH VPRADREVIA 240
241 RLRNSILALA KCKLMIYDTS IQYAYEESLR YEAHELLQQN AIYDIGQQTQ ARLRDADE
|
| Detection Method: |  |
| Confidence: | 69.154902 |
| Match: | 2nn6H |
| Description: | No description for 2nn6H was found. |
| Term | Confidence | Notes |
| RNA binding | 5.18414740305744 | bayes_pls_golite062009 |
| structural constituent of ribosome | 3.89236528662255 | bayes_pls_golite062009 |
| mRNA binding | 3.82977088614136 | bayes_pls_golite062009 |
| nucleic acid binding | 3.68444148122352 | bayes_pls_golite062009 |
| structural molecule activity | 3.54418030121155 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 3.40736445988244 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 3.3097066639101 | bayes_pls_golite062009 |
| exoribonuclease activity | 3.27082657120932 | bayes_pls_golite062009 |
| binding | 2.8667878224392 | bayes_pls_golite062009 |
| ribonuclease activity | 1.89205340530046 | bayes_pls_golite062009 |
| 1.63970610538963 | bayes_pls_golite062009 | |
| 3'-5' exonuclease activity | 1.55351486913613 | bayes_pls_golite062009 |
| transcription regulator activity | 1.43703138180882 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 1.42151567812515 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 1.35850109411274 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 1.35845277283398 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 1.35845277283398 | bayes_pls_golite062009 |
| exonuclease activity | 1.25488463068335 | bayes_pls_golite062009 |
| DNA binding | 1.20852534725468 | bayes_pls_golite062009 |
| protein binding | 0.934192915895039 | bayes_pls_golite062009 |
| mRNA 3'-UTR binding | 0.489176583045793 | bayes_pls_golite062009 |
| transcription factor activity | 0.386248501195543 | bayes_pls_golite062009 |
| ligase activity | 0.346041081217685 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.32222928997178 | bayes_pls_golite062009 |
| poly-pyrimidine tract binding | 0.30467150200016 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.246726936182314 | bayes_pls_golite062009 |
| aspartate-tRNA ligase activity | 0.151650064901878 | bayes_pls_golite062009 |
| translation initiation factor activity | 0.11625379846973 | bayes_pls_golite062009 |
| catalytic activity | 0.113112541746059 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.1069917291606 | bayes_pls_golite062009 |
| DNA-directed RNA polymerase activity | 0.0740938021136293 | bayes_pls_golite062009 |
| RNA polymerase activity | 0.0740938021136293 | bayes_pls_golite062009 |
