| Protein: | FBpp0292546 |
| Organism: | Drosophila melanogaster |
| Length: | 1091 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0292546.
| Description | E-value | Query Range |
Subject Range |
|
|
403.0 | [0..15] | [1090..1] |
|
Region A: Residues: [1-190] |
1 11 21 31 41 51
| | | | | |
1 MPPMPQMPPM PPLQLDKNTL VGHLREHERA LIFGSRSPEE APEFKLVHLA QQRPEEQQRL 60
61 EERKRPGEAE QHGGNPHQRR QRRSLPSEDG NGPLPPEEEE QEAGEDVEAR LQLQQSPQLI 120
121 DDAFIFIRRT ENGTQFVEHS PQLLKRLERC FYRSPAAALD LCEPGNVRGV FQQNGSDLVI 180
181 HPLPARFGTG
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [191-279] |
1 11 21 31 41 51
| | | | | |
1 THVLYQARVD KSGGGYSEAS SRRTASPLDS QLQFEPDAEE FNEPRRRLRA QSQLQSPLRL 60
61 RFQPRHHHPH QHHQQRRRRY IGDAPRSRW
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [280-716] |
1 11 21 31 41 51
| | | | | |
1 SDIPEELFIE TAIFVDSDLY AHMQKNFPTN TESKVVSFLL AMINGVQLLY HHPTLGRRIN 60
61 FVLKRLEIWK SWDPPGLVRS RDVENYLNSF CKWQEKLNPF SDADPLHYDH ALVLTGLDLV 120
121 TYDKGKANSQ VVGMATVKGM CTSIYSCTIN EAKHFESVFV VAHEIGHNLG MRHDAKEISC 180
181 DPTMHIMSPK LGSGKVTWSK CSRTYLEDFL MDPQAECLFD RDSFAGPWDH TAGGRLPGER 240
241 FNANQQCMLR FGKNFMQAST QSKMEICRDL HCRQDGLPWT SHPALEGTEC GPNMWCRGGT 300
301 CEARSSKQGS YSALKSWPPE HIPEATHEKI IRHEPNRIPP LLHDYNPMDN ELPGSPSNWG 360
361 EWSEPSACES GCLYGQSRRL LEGSTGLRTL NRSCLNFPSR CIGRDRRFVT CNTPQCHKVP 420
421 VQTINDFATQ VCMQARK
|
| Detection Method: | |
| Confidence: | 38.0 |
| Match: | 2dw0A |
| Description: | No description for 2dw0A was found. |
|
Region A: Residues: [717-1011] |
1 11 21 31 41 51
| | | | | |
1 SDPELTGEGQ QLPSTLDASC KIFCRTRTNG TKSRRWTFPD GTTCKAKQHN PEDITYCISG 60
61 RCERFSCDNS TSNFFKMDSS FCEARSVRPT RDSSDQESRQ QTNRQRYAER QEGKPQKNHY 120
121 ENEVAKRPSY GQGNHINAPA SPYKRRNYHK PYPPEIPRPP PPASASLIAL DRSSSSESEW 180
181 VAHPGCHSNC MTDSKGVQGV TSRLTGVESI QLCSYRIQPC ERLQTAAEYA EQTCARYRQK 240
241 VRGLSGHGAQ ISASIDEPDR SCRVGCQDEF IKYRYYLVNG RNGHFPPGTR CSPVG
|
| Detection Method: | |
| Confidence: | 10.69897 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor binding | 3.35439555347435 | bayes_pls_golite062009 |
| growth factor activity | 2.88505170485169 | bayes_pls_golite062009 |
| binding | 1.87945097283832 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 1.68241417866789 | bayes_pls_golite062009 |
| protein binding | 1.62006751483747 | bayes_pls_golite062009 |
| heparin binding | 1.30139703416568 | bayes_pls_golite062009 |
| pattern binding | 1.26957983931218 | bayes_pls_golite062009 |
| polysaccharide binding | 1.11978732751628 | bayes_pls_golite062009 |
| ErbB-2 class receptor binding | 0.847169032980225 | bayes_pls_golite062009 |
| carbohydrate binding | 0.72748768329894 | bayes_pls_golite062009 |
| epidermal growth factor receptor binding | 0.66302254098895 | bayes_pls_golite062009 |
| transcription factor binding | 0.556175571276939 | bayes_pls_golite062009 |
| ErbB-3 class receptor binding | 0.37496803961958 | bayes_pls_golite062009 |
|
Region A: Residues: [1012-1091] |
1 11 21 31 41 51
| | | | | |
1 KRYCVYGRCL EFGDDDLPLD KTHISLGQLR TRRKRSSISN DLFNITEIFI KPSHSDISAE 60
61 NIEFTQPIHV SADELSSKSR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
