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Protein Overview: FBpp0292546

General Information:
Name(s) found: FBpp0292546 [FlyBase]
Description(s) found:
Found 9 descriptions.
SHOW ALL
  • type=protein; loc=2R:join(18698897..18699017,18699565..18699708,18699808..18700043,18700216..18701054,18701106..18701234,18701292..18701541,18701602..18702397,18702455..18703138,18703193..18703269); ID=FBpp0292546; name=stl-PD; parent=FBgn0086408,FBtr0303512; dbxref=FlyBase:FBpp0292546,FlyBase_Annotation_IDs:CG3622-PD,REFSEQ:NP_001188985,GB_protein:ADV37231,FlyMine:FBpp0292546,modMine:FBpp0292546; MD5=42777668bd276fea4f6f0ce942636e29; length=1091; release=r5.43; species=Dmel; [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1091 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPMPQMPPM PPLQLDKNTL VGHLREHERA LIFGSRSPEE APEFKLVHLA QQRPEEQQRL  60
   61 EERKRPGEAE QHGGNPHQRR QRRSLPSEDG NGPLPPEEEE QEAGEDVEAR LQLQQSPQLI 120
  121 DDAFIFIRRT ENGTQFVEHS PQLLKRLERC FYRSPAAALD LCEPGNVRGV FQQNGSDLVI 180
  181 HPLPARFGTG THVLYQARVD KSGGGYSEAS SRRTASPLDS QLQFEPDAEE FNEPRRRLRA 240
  241 QSQLQSPLRL RFQPRHHHPH QHHQQRRRRY IGDAPRSRWS DIPEELFIET AIFVDSDLYA 300
  301 HMQKNFPTNT ESKVVSFLLA MINGVQLLYH HPTLGRRINF VLKRLEIWKS WDPPGLVRSR 360
  361 DVENYLNSFC KWQEKLNPFS DADPLHYDHA LVLTGLDLVT YDKGKANSQV VGMATVKGMC 420
  421 TSIYSCTINE AKHFESVFVV AHEIGHNLGM RHDAKEISCD PTMHIMSPKL GSGKVTWSKC 480
  481 SRTYLEDFLM DPQAECLFDR DSFAGPWDHT AGGRLPGERF NANQQCMLRF GKNFMQASTQ 540
  541 SKMEICRDLH CRQDGLPWTS HPALEGTECG PNMWCRGGTC EARSSKQGSY SALKSWPPEH 600
  601 IPEATHEKII RHEPNRIPPL LHDYNPMDNE LPGSPSNWGE WSEPSACESG CLYGQSRRLL 660
  661 EGSTGLRTLN RSCLNFPSRC IGRDRRFVTC NTPQCHKVPV QTINDFATQV CMQARKSDPE 720
  721 LTGEGQQLPS TLDASCKIFC RTRTNGTKSR RWTFPDGTTC KAKQHNPEDI TYCISGRCER 780
  781 FSCDNSTSNF FKMDSSFCEA RSVRPTRDSS DQESRQQTNR QRYAERQEGK PQKNHYENEV 840
  841 AKRPSYGQGN HINAPASPYK RRNYHKPYPP EIPRPPPPAS ASLIALDRSS SSESEWVAHP 900
  901 GCHSNCMTDS KGVQGVTSRL TGVESIQLCS YRIQPCERLQ TAAEYAEQTC ARYRQKVRGL 960
  961 SGHGAQISAS IDEPDRSCRV GCQDEFIKYR YYLVNGRNGH FPPGTRCSPV GKRYCVYGRC1020
 1021 LEFGDDDLPL DKTHISLGQL RTRRKRSSIS NDLFNITEIF IKPSHSDISA ENIEFTQPIH1080
 1081 VSADELSSKS R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..190] MSA 1.20898 View MSA. No confident structure predictions are available.
    2 View Details [191..279] deduced N/A No confident structure predictions are available.
    3 View Details [280..716] PSI-BLAST 38.0 No description for 2dw0A was found.
    4 View Details [717..1011] PSI-BLAST 10.69897 Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor
    5 View Details [1012..1091] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • receptor binding
    		•  3.35439555347435 bayes_pls_golite062009
  • growth factor activity
    		•  2.88505170485169 bayes_pls_golite062009
  • binding
    		•  1.87945097283832 bayes_pls_golite062009
  • glycosaminoglycan binding
    		•  1.68241417866789 bayes_pls_golite062009
  • protein binding
    		•  1.62006751483747 bayes_pls_golite062009
  • heparin binding
    		•  1.30139703416568 bayes_pls_golite062009
  • pattern binding
    		•  1.26957983931218 bayes_pls_golite062009
  • polysaccharide binding
    		•  1.11978732751628 bayes_pls_golite062009
  • ErbB-2 class receptor binding
    		•  0.847169032980225 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.72748768329894 bayes_pls_golite062009
  • epidermal growth factor receptor binding
    		•  0.66302254098895 bayes_pls_golite062009
  • transcription factor binding
    		•  0.556175571276939 bayes_pls_golite062009
  • ErbB-3 class receptor binding
    		•  0.37496803961958 bayes_pls_golite062009
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle