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View Structure Prediction Details

Protein: edl-PA
Organism: Drosophila melanogaster
Length: 177 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for edl-PA.

Description E-value Query
Range
Subject
Range
gi|73954481 - gi|73954481|ref|XP_857107.1| PREDICTED: similar to Friend leukemia integration 1 transcription facto...
180.0 [0..5] [177..20]

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Predicted Domain #1
Region A:
Residues: [1-74]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVESSYTKY AGRVPPLDLT QVNGGQDLWG GNGGGNNASA RRHLHHPYQM LDKCRGGVTL  60
   61 ISASSAISST SNSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [75-177]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDNNNRLMSA DDGTTSLLHP LGSDGLPLDP RDWTRADVWK WLINMAVSEG LEVTAELPQK  60
   61 FPMNGKALCL MSLDMYLCRV PVGGKMLYRD FRVRLARAMA LLS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.69897
Match: 1sv0C
Description: Crystal Structure Of Yan-SAM/Mae-SAM Complex
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.98719702611774 bayes_pls_golite062009
transcription regulator activity 1.74320052575423 bayes_pls_golite062009
protein binding 1.41065934507744 bayes_pls_golite062009
nucleic acid binding 1.06494203590825 bayes_pls_golite062009
DNA binding 1.04271298640801 bayes_pls_golite062009
transcription factor activity 0.70384832940355 bayes_pls_golite062009
catalytic activity 0.415601732277814 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.273957228129152 bayes_pls_golite062009
transcription repressor activity 0.131541277885705 bayes_pls_golite062009
transferase activity 0.129170106978418 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle