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View Structure Prediction Details

Protein: edl-PA
Organism: Drosophila melanogaster
Length: 177 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for edl-PA.

Description E-value Query
Range
Subject
Range
gi|73954481 - gi|73954481|ref|XP_857107.1| PREDICTED: similar to Friend leukemia integration 1 transcription facto...
180.0 [0..5] [177..20]

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Predicted Domain #1
Region A:
Residues: [1-74]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVESSYTKY AGRVPPLDLT QVNGGQDLWG GNGGGNNASA RRHLHHPYQM LDKCRGGVTL  60
   61 ISASSAISST SNSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [75-177]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDNNNRLMSA DDGTTSLLHP LGSDGLPLDP RDWTRADVWK WLINMAVSEG LEVTAELPQK  60
   61 FPMNGKALCL MSLDMYLCRV PVGGKMLYRD FRVRLARAMA LLS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.69897
Match: 1sv0C
Description: Crystal Structure Of Yan-SAM/Mae-SAM Complex
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.98719702611774 bayes_pls_golite062009
transcription regulator activity 1.74320052575423 bayes_pls_golite062009
protein binding 1.41065934507744 bayes_pls_golite062009
nucleic acid binding 1.06494203590825 bayes_pls_golite062009
DNA binding 1.04271298640801 bayes_pls_golite062009
transcription factor activity 0.70384832940355 bayes_pls_golite062009
catalytic activity 0.415601732277814 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.273957228129152 bayes_pls_golite062009
transcription repressor activity 0.131541277885705 bayes_pls_golite062009
transferase activity 0.129170106978418 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle