| Protein: | Dip3-PA |
| Organism: | Drosophila melanogaster |
| Length: | 348 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Dip3-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
255.0 | [0..1] | [348..1] |
|
Region A: Residues: [1-145] |
1 11 21 31 41 51
| | | | | |
1 MSRKNGNQDT FPKTEKMQRY YAERETTGPE FDDRLIKLVR ANPAIYDVSH PHYRRNPVRV 60
61 DIWDRIANEL GASSRFLQTK WKNIRYNYLQ EVKAIETGQA NPNVRKRRFT EDLSFLQNTA 120
121 QTYNVKKSQS YVAQQNGMGS DNDSN
|
| Detection Method: |  |
| Confidence: | 0.955 |
| Match: | 2cqqA |
| Description: | Solution Structure of RSGI RUH-037, a myb DNA-binding domain in human cDNA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.86538715425734 | bayes_pls_golite062009 |
| DNA binding | 4.40186699787632 | bayes_pls_golite062009 |
| nucleic acid binding | 3.98153794570167 | bayes_pls_golite062009 |
| transcription factor activity | 3.78935192723648 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 3.25454589469681 | bayes_pls_golite062009 |
| transcription activator activity | 2.92652250400688 | bayes_pls_golite062009 |
| binding | 2.92574888336072 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.00875399167309 | bayes_pls_golite062009 |
| protein binding | 1.84594855626241 | bayes_pls_golite062009 |
| transcription repressor activity | 1.69615348178304 | bayes_pls_golite062009 |
| transcription factor binding | 1.24678737091956 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.865913662624162 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.691780246385357 | bayes_pls_golite062009 |
| chromatin binding | 0.65622150362507 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.0723215858239072 | bayes_pls_golite062009 |
|
Region A: Residues: [146-259] |
1 11 21 31 41 51
| | | | | |
1 SFLYPDPEHL KIDASEGYDI IELDNSDDGS NSDDNEIVPE LQLVMGESKQ QLSLPTTLNG 60
61 TSSSNHSHEH DQASSPASSP LLTPMVVMGN GYGQEVHLEQ QQTQEQKPFK NSSL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [260-348] |
1 11 21 31 41 51
| | | | | |
1 SNGEVTIEPI YKPAAIRRAL PSDFLTNPFK RKATQAPLQT QVTSSFNDPI ELYCLSLVDT 60
61 LRSMRRSERE RVKFEFANIL KDAKYKDES
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
