| Protein: | FBpp0309235, eIF... |
| Organism: | Drosophila melanogaster |
| Length: | 910 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0309235, eIF....
| Description | E-value | Query Range |
Subject Range |
|
|
1011.0 | [0..1] | [881..108] |
|
Region A: Residues: [1-291] |
1 11 21 31 41 51
| | | | | |
1 MSRFFANGSE SESESSEEEI QATNFNKASA FQFSDDEEEV KRVVRSTKEK RYENLTSIIK 60
61 TIRNHKKIKD IPNTLSSFED LTRAYQKALP VISKEENGIT PRFYIRCLAE LEDFINEVWE 120
121 DREGRKNLSK NNSKSLGTLR QKVRKYIKDF EDDLSRFREA PDQESEAEDE VVALESDGGD 180
181 AGDDSDAGVK PTEAVPKAVK SAPAKAAPAD DDDSDDSIDW DSDSESETES SDDENQYQNM 240
241 RERFLKRTTE KEEKDDDKRK DKRKEQKTKI RKRAEDDEDG EWETVVKGHV V
|
| Detection Method: |  |
| Confidence: | 12.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [292-365] |
1 11 21 31 41 51
| | | | | |
1 EKPKMFEKDA EIDVPLVLAK LLEIMSARGK KRTDRRLQID LLFELRDISD QHNLGTAVSV 60
61 KIHFNIISAI YDYN
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [366-567] |
1 11 21 31 41 51
| | | | | |
1 QKISEPMKLE HWALLLEVMQ SMMKLLLANA DIIMSESVAE EHEEYATSPF YVRGCPLAAV 60
61 ERLDDEFVKL LKECDPHSND YVSRLKDEVN VVKTIELVLQ YFERSGTNNE RCRIYLRKIE 120
121 HLYYKFDPEV LKKKRGELPA TTSTSVDVMD KLCKFIYAKD DTDRIRTRAI LAHIYHHAMH 180
181 DNWFQARDLV LMSHLQDNID AA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [568-686] |
1 11 21 31 41 51
| | | | | |
1 DPATRILYNR MMANLGLCAF RQGNVKDAHH CLVDLMVTGK PKELLAQGLL PQRQHERSAE 60
61 QEKIEKQRQM PFHMHINLEL LECVYLVSAM LLEIPYIAAH EFDARRRMIS KTFYQQLRS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [687-843] |
1 11 21 31 41 51
| | | | | |
1 SERQSLVGPP ESMREHVVAA AKAMRCGNWQ ACANFIVNKK MNTKVWDLFY ESDRVREMLT 60
61 KFIKEESLRT YLFTYSNVYT SISIPSLAQM YELPVPKVHS IISKMIINEE LMASLDDPSE 120
121 TVGMHRSEPS RLQALAMQFV DKVTNLVDVN EKVFDMK
|
| Detection Method: | |
| Confidence: | 2.53 |
| Match: | 1ufmA |
| Description: | Solution structure of the PCI domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.85334044543318 | bayes_pls_golite062009 |
| nucleic acid binding | 2.8293727459515 | bayes_pls_golite062009 |
| DNA binding | 2.66906990480864 | bayes_pls_golite062009 |
| binding | 2.14387047687719 | bayes_pls_golite062009 |
| transcription factor activity | 1.97506348695089 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.764002516817766 | bayes_pls_golite062009 |
| structural molecule activity | 0.756450227832198 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.665091289283954 | bayes_pls_golite062009 |
| transcription activator activity | 0.542530812773621 | bayes_pls_golite062009 |
| transcription repressor activity | 0.423955395883599 | bayes_pls_golite062009 |
| protein binding | 0.0300097532511948 | bayes_pls_golite062009 |
|
Region A: Residues: [844-910] |
1 11 21 31 41 51
| | | | | |
1 QGNFFQRGNM GNRGDRGYNR NQNNQGGNWL GQRRDRNNRN RNQRGHHKNN QDRQQQQQQQ 60
61 VQTIDEE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
