| Protein: | Sema-2a-PC |
| Organism: | Drosophila melanogaster |
| Length: | 697 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sema-2a-PC.
| Description | E-value | Query Range |
Subject Range |
|
|
531.0 | [0..1] | [697..1] |
|
Region A: Residues: [1-636] |
1 11 21 31 41 51
| | | | | |
1 MNGIHWLLFG SCLMLISQIE AVTEELSPDH VREFNCGKLY YRTFHMNEDR DTLYVGAMDR 60
61 VFRVNLQNIS SSNCNRDVIN LEPTRDDVVS CVSKGKSQIF DCKNHVRVIQ SMDQGDRLYV 120
121 CGTNAHNPKD YVIYANLTHL PRSEYVIGVG LGIAKCPYDP LDNSTAIYVE NGNPGGLPGL 180
181 YSGTNAEFTK ADTVIFRTDL YNTSAKRLEY KFKRTLKYDS KWLDKPNFVG SFDIGEYVYF 240
241 FFRETAVEYI NCGKAVYSRI ARVCKKDVGG KNLLAHNWAT YLKARLNCSI SGEFPFYFNE 300
301 IQSVYQLPSD KSRFFATFTT STNGLIGSAV CSFHINEIQA AFNGKFKEQS SSNSAWLPVL 360
361 NSRVPEPRPG TCVNDTSNLP DTVLNFIRSH PLMDKAVNHE HNNPVYYKRD LVFTKLVVDK 420
421 IRIDILNQEY IVYYVGTNLG RIYKIVQYYR NGESLSKLLD IFEVAPNEAI QVMEISQTRK 480
481 SLYIGTDHRI KQIDLAMCNR RYDNCFRCVR DPYCGWDKEA NTCRPYELDL LQDVANETSD 540
541 ICDSSVLKKK IVVTYGQSVH LGCFVKIPEV LKNEQVTWYH HSKDKGRYEI RYSPTKYIET 600
601 TERGLVVVSV NEADGGRYDC HLGGSLLCSY NITVDA
|
| Detection Method: |  |
| Confidence: | 96.39794 |
| Match: | 1olzA |
| Description: | The ligand-binding face of the semaphorins revealed by the high resolution crystal structure of SEMA4D |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| antigen binding | 4.06466268219034 | bayes_pls_golite062009 |
| fibroblast growth factor 1 binding | 3.22003832960927 | bayes_pls_golite062009 |
| fibroblast growth factor binding | 2.46885430509177 | bayes_pls_golite062009 |
| fibroblast growth factor receptor activity | 1.8360014271135 | bayes_pls_golite062009 |
| chemorepellent activity | 1.79885899802089 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.77462533261228 | bayes_pls_golite062009 |
| receptor activity | 1.73411211759611 | bayes_pls_golite062009 |
| receptor binding | 1.69538764684177 | bayes_pls_golite062009 |
| actin binding | 1.57909436422457 | bayes_pls_golite062009 |
| binding | 1.56912444046433 | bayes_pls_golite062009 |
| molecular transducer activity | 1.48908901984354 | bayes_pls_golite062009 |
| signal transducer activity | 1.48908901984354 | bayes_pls_golite062009 |
| actin filament binding | 1.47359288623575 | bayes_pls_golite062009 |
| semaphorin receptor activity | 1.39530633894436 | bayes_pls_golite062009 |
| axon guidance receptor activity | 1.25652075776666 | bayes_pls_golite062009 |
| protein complex binding | 1.19581190330569 | bayes_pls_golite062009 |
| transmembrane receptor activity | 1.17930092269192 | bayes_pls_golite062009 |
| protein binding | 1.12981051950964 | bayes_pls_golite062009 |
| peptide antigen binding | 1.03871842737922 | bayes_pls_golite062009 |
| hepatocyte growth factor receptor activity | 0.723051846539421 | bayes_pls_golite062009 |
| platelet-derived growth factor receptor binding | 0.68620352874827 | bayes_pls_golite062009 |
| cell adhesion molecule binding | 0.63737386998612 | bayes_pls_golite062009 |
| integrin binding | 0.32413307774101 | bayes_pls_golite062009 |
| transmembrane receptor protein tyrosine kinase activity | 0.31988469097193 | bayes_pls_golite062009 |
| viral receptor activity | 0.171304187186109 | bayes_pls_golite062009 |
| growth factor binding | 0.0783438827475496 | bayes_pls_golite062009 |
|
Region A: Residues: [637-697] |
1 11 21 31 41 51
| | | | | |
1 HRCTPPNKSN DYQKIYSDWC HEFEKYKTAM KSWEKKQAQC STRQNFSSNQ HPNEIFRKPN 60
61 V
|
| Detection Method: | |
| Confidence: | 12.69897 |
| Match: | 2illA |
| Description: | No description for 2illA was found. |
