| Protein: | Arc1-PA |
| Organism: | Drosophila melanogaster |
| Length: | 254 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Arc1-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
213.0 | [0..2] | [253..225] |
|
Region A: Residues: [1-119] |
1 11 21 31 41 51
| | | | | |
1 MAQLTQMTNE QLRELIEAVR AAAVGAAGSA AAAGGADASR GKGNFSACTH SFGGTRDHDV 60
61 VEEFIGNIET YKDVEGISDE NALKGISLLF YGMASTWWQG VRKEATTWKE AIALIREHF
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [120-254] |
1 11 21 31 41 51
| | | | | |
1 SPTKPAYQIY MEFFQNKQDD HDPIDTFVIQ KRALLAQLPS GRHDEETELD LLFGLLNIKY 60
61 RKHISRHSVH TFKDLLEQGR IIEHNNQEDE EQLATAKNTR GSKRTTRCTY CSFRGHTFDN 120
121 CRKRQKDRQE EQHEE
|
| Detection Method: | |
| Confidence: | 7.0 |
| Match: | 1bajA |
| Description: | HIV-1 CAPSID PROTEIN C-TERMINAL FRAGMENT PLUS GAG P2 DOMAIN |
Matching Structure (courtesy of the PDB): |
|
