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Protein Overview: Arc1-PA

General Information:
Name(s) found: Arc1-PA / FBpp0086687 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • The gene Arc1 is referred to in FlyBase by the symbol Dmel\Arc1 (CG12505, FBgn0033926). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:10245428..10247799. It has the cytological map location 50F6. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: zinc ion binding; nucleic acid binding. There is experimental evidence that it is involved in the biological process</span>: behavioral response to starvation. 8 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 254 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: behavioral response to starvation [IDA]
    Molecular Function: nucleic acid binding [IEA]
    zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQLTQMTNE QLRELIEAVR AAAVGAAGSA AAAGGADASR GKGNFSACTH SFGGTRDHDV  60
   61 VEEFIGNIET YKDVEGISDE NALKGISLLF YGMASTWWQG VRKEATTWKE AIALIREHFS 120
  121 PTKPAYQIYM EFFQNKQDDH DPIDTFVIQK RALLAQLPSG RHDEETELDL LFGLLNIKYR 180
  181 KHISRHSVHT FKDLLEQGRI IEHNNQEDEE QLATAKNTRG SKRTTRCTYC SFRGHTFDNC 240
  241 RKRQKDRQEE QHEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..119] MSA 10.256995 View MSA. No confident structure predictions are available.
    2 View Details [120..254] PSI-BLAST 7.0 HIV-1 CAPSID PROTEIN C-TERMINAL FRAGMENT PLUS GAG P2 DOMAIN


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.43

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle