| Protein: | Arc1-PA |
| Organism: | Drosophila melanogaster |
| Length: | 254 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Arc1-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
213.0 | [0..2] | [253..225] |
|
Region A: Residues: [1-119] |
1 11 21 31 41 51
| | | | | |
1 MAQLTQMTNE QLRELIEAVR AAAVGAAGSA AAAGGADASR GKGNFSACTH SFGGTRDHDV 60
61 VEEFIGNIET YKDVEGISDE NALKGISLLF YGMASTWWQG VRKEATTWKE AIALIREHF
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.653 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.631 | N/A | N/A | a.204.1 | Description not found. |
| View | Download | 0.557 | N/A | N/A | d.6.1 | Prion-like |
| View | Download | 0.505 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.505 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.500 | N/A | N/A | a.29.16 | Description not found. |
| View | Download | 0.429 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.428 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
|
Region A: Residues: [120-254] |
1 11 21 31 41 51
| | | | | |
1 SPTKPAYQIY MEFFQNKQDD HDPIDTFVIQ KRALLAQLPS GRHDEETELD LLFGLLNIKY 60
61 RKHISRHSVH TFKDLLEQGR IIEHNNQEDE EQLATAKNTR GSKRTTRCTY CSFRGHTFDN 120
121 CRKRQKDRQE EQHEE
|
| Detection Method: | |
| Confidence: | 7.0 |
| Match: | 1bajA |
| Description: | HIV-1 CAPSID PROTEIN C-TERMINAL FRAGMENT PLUS GAG P2 DOMAIN |
Matching Structure (courtesy of the PDB): |
|
