| Protein: | cbs-PA |
| Organism: | Drosophila melanogaster |
| Length: | 611 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cbs-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
310.0 | [0..4] | [597..2237] |
|
Region A: Residues: [1-331] |
1 11 21 31 41 51
| | | | | |
1 MFATLKNKIK EETGDDVVQS ANQRYPGNNN NNYRLRSRRV SINSNSADDV GGGGFYNESE 60
61 QLCELRSQCN ELTTKLSTVT QGLQQLQEEK TRVDKTNEIL LESVRVAQTQ KDIYCEEQEK 120
121 IQNLQQIEID KLKNLLSFRE QESVDRMGLM RQQTQQIESL SEELERLRPI ESVAEDLRDE 180
181 LEQLRHSTQQ EKNLLTTTLA AVQEENRHLK KRMKIVEESR LESLGKLNSE QQVQALIREH 240
241 KLLEQHLEEA HLQLSDIKGS WSGQNLALET QVSRLSKQVA EETTEKRKAL KSRDDAIESR 300
301 KQVSFELEKA KDEIKQRDDK VKLLEEEIDE L
|
| Detection Method: |  |
| Confidence: | 18.154902 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [332-453] |
1 11 21 31 41 51
| | | | | |
1 SVALKECREE NEQQVLFERN KSQNLETEVK DLKTRLTAAD DRFSEYSSNA EQVAQKLRVQ 60
61 VTEKQEQLDE TIMQLEIERE EKMTAILRNA EIAQSEDILR QQLRLERSEA SDLQERNNQL 120
121 VR
|
| Detection Method: | |
| Confidence: | 2.03 |
| Match: | 1m1jC |
| Description: | Fibrinogen C-terminal domains; Fibrinogen gamma chain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [454-611] |
1 11 21 31 41 51
| | | | | |
1 DISEARQTLQ QVSSTAQDNA DKLTEFERVQ LEIIEKNKTI KTLNQRLIDL KKTVQKELRS 60
61 AQISTDSESH PTTTPGHRIS SSSLEAFSTG DKGNCVIMDE VNFQYLKHVI VKFLTSREVE 120
121 ARHLVRAVST LLQLTTEEEK LLHDTLNWKM SWFGMKPT
|
| Detection Method: | |
| Confidence: | 3.30103 |
| Match: | 2iw5A |
| Description: | No description for 2iw5A was found. |
| Term | Confidence | Notes |
| binding | 2.45058468282438 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.1457670954804 | bayes_pls_golite062009 |
| chromatin binding | 1.87338136043944 | bayes_pls_golite062009 |
| actin binding | 1.48871115327078 | bayes_pls_golite062009 |
| transcription regulator activity | 1.38505016881116 | bayes_pls_golite062009 |
| DNA binding | 1.29464499177454 | bayes_pls_golite062009 |
| nucleic acid binding | 1.27419374347122 | bayes_pls_golite062009 |
| protein binding | 1.03780839342631 | bayes_pls_golite062009 |
| transcription factor activity | 0.694399096428821 | bayes_pls_golite062009 |
| histone binding | 0.508815747007202 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.45737598186064 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.41388714312156 | bayes_pls_golite062009 |
| actin filament binding | 0.26311995282891 | bayes_pls_golite062009 |
