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View Structure Prediction Details

Protein: FBpp0292099
Organism: Drosophila melanogaster
Length: 706 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0292099.

Description E-value Query
Range
Subject
Range
gi|220951616 - gi|220951616|gb|ACL88351.1| nemy-PD [synthetic construct]
FBpp0292098 - type=protein; loc=2R:complement(8558681..8558854,8559062..8560092,8560169..8560542,8560605..8560844,...
642.0 [0..1] [706..1]

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Predicted Domain #1
Region A:
Residues: [1-69]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKGVPTLAG RNLRLLTTQA QVLVHQRAKA SAAEPVEDFD QETDLLKRAK FGHTGKQLQQ  60
   61 KIINEKNLR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [70-196]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APPLMNLVFA NRKLSFYDTS STPKTKEDNA KLHREQEQRN AEDVLFDMFA SEETGLISMG  60
   61 KFLAGLKTTG IRRNDPRVRE LMDNLKKVHK LNNYETGSSA ETQHLNRETF KAVVAPNIVL 120
  121 IAKAFRQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.14
Match: 1tizA
Description: Solution Structure of a Calmodulin-Like Calcium-Binding Domain from Arabidopsis thaliana
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 2.14476122564273 bayes_pls_golite062009
protein binding 1.07500404614825 bayes_pls_golite062009
calcium ion binding 0.588882318835794 bayes_pls_golite062009
ion binding 0.558610258943664 bayes_pls_golite062009
cation binding 0.55183867044446 bayes_pls_golite062009
metal ion binding 0.55183867044446 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [197-305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QFVIPDFTSF VKDIEDIYNR CKTNTLGKLA DYIPQLARYN PDSWGLSICT IDGQRFSIGD  60
   61 VDVPFTLQSC SKPLTYAIAL EKLGPKVVHS YVGQEPSGRN FNELVLDQN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.045757
Match: 2dfwA
Description: No description for 2dfwA was found.

Predicted Domain #4
Region A:
Residues: [306-706]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKPHNPMINA GAILTCSLMN ALVKPDMTSA EIFDYTMSWF KRLSGGEYIG FNNAVFLSER  60
   61 EAADRNYALG FYMRENKCFP KRTNLKEVMD FYFQCCSMET NCEAMSVIAA SLANGGICPT 120
  121 TEEKVFRPEV IRDVLSIMHS CGTYDYSGQF AFKVGLPAKS GVSGGMMLVI PNVMGIFAWS 180
  181 PPLDHLGNTV RGLQFCEELV SMFNFHRYDN LKHLSNKKDP RKHRYETKGL SIVNLLFSAA 240
  241 SGDVTALRRH RLSGMDITLA DYDGRTALHL AASEGHLECV KFLLEQCHVP HNPKDRWGNL 300
  301 PVDEAENFGH CHVVEFLRSW AEKADQSSEE CKPEAVTSKT QADEEICSTS DLETSPTTSP 360
  361 IPTPVESGSR AGSGRSSPVP SDAGSTASAG SSIDDKTKPG L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 78.09691
Match: 1n11A
Description: Ankyrin-R
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.69518662254742 bayes_pls_golite062009
protein binding 1.62940095931841 bayes_pls_golite062009
transcription factor binding 0.16045567443462 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle