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Protein Overview: gi|220951616

General Information:
Name(s) found: gi|220951616 [NCBI NR]
Description(s) found:
  • gi|220951616|gb|ACL88351.1| nemy-PD [synthetic construct] [NCBI NR]
    • Organism: synthetic construct
    Length: 716 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKGVPTLAG RNLRLLTTQA QVLVHQRAKA SAAEPVEDFD QETDLLKRAK FGHTGKQLQQ  60
   61 KIINEKNLRA PPLMNLVFAN RKLSFYDTSS TPKTKEDNAK LSQRRHYSMR PHREQEQRNA 120
  121 EDVLFDMFAS EETGLISMGK FLAGLKTTGI RRNDPRVREL MDNLKKVHKL NNYETGSSAE 180
  181 TQHLNRETFK AVVAPNIVLI AKAFRQQFVI PDFTSFVKDI EDIYNRCKTN TLGKLADYIP 240
  241 QLARYNPDSW GLSICTIDGQ RFSIGDVDVP FTLQSCSKPL TYAIALEKLG PKVVHSYVGQ 300
  301 EPSGRNFNEL VLDQNKKPHN PMINAGAILT CSLMNALVKP DMTSAEIFDY TMSWFKRLSG 360
  361 GEYIGFNNAV FLSEREAADR NYALGFYMRE NKCFPKRTNL KEVMDFYFQC CSMETNCEAM 420
  421 SVIAASLANG GICPTTEEKV FRPEVIRDVL SIMHSCGTYD YSGQFAFKVG LPAKSGVSGG 480
  481 MMLVIPNVMG IFAWSPPLDH LGNTVRGLQF CEELVSMFNF HRYDNLKHLS NKKDPRKHRY 540
  541 ETKGLSIVNL LFSAASGDVT ALRRHRLSGM DITLADYDGR TALHLAASEG HLECVKFLLE 600
  601 QCHVPHNPKD RWGNLPVDEA ENFGHCHVVE FLRSWAEKAD QSSEECKPEA VTSKTQADEE 660
  661 ICSTSDLETS PTTSPIPTPV ESGSRAGSGR SSPVPSDAGS TASAGSSIDD KTKPGL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..111] deduced N/A No confident structure predictions are available.
    2 View Details [112..206] FFAS03 1.05 Solution Structure Of The Calcium-loaded N-Terminal Sensor Domain Of Centrin
    3 View Details [207..305] PSI-BLAST 49.522879 No description for 2dfwA was found.
    4 View Details [306..716] PSI-BLAST 69.522879 Ankyrin-R

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  1.69518662254742 bayes_pls_golite062009
  • protein binding
    		•  1.62940095931841 bayes_pls_golite062009
  • transcription factor binding
    		•  0.16045567443462 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.49

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle