| Protein: | gi|220951616 |
| Organism: | synthetic construct |
| Length: | 716 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220951616.
| Description | E-value | Query Range |
Subject Range |
|
|
665.0 | [0..1] | [716..1] |
|
Region A: Residues: [1-111] |
1 11 21 31 41 51
| | | | | |
1 MLKGVPTLAG RNLRLLTTQA QVLVHQRAKA SAAEPVEDFD QETDLLKRAK FGHTGKQLQQ 60
61 KIINEKNLRA PPLMNLVFAN RKLSFYDTSS TPKTKEDNAK LSQRRHYSMR P
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [112-206] |
1 11 21 31 41 51
| | | | | |
1 HREQEQRNAE DVLFDMFASE ETGLISMGKF LAGLKTTGIR RNDPRVRELM DNLKKVHKLN 60
61 NYETGSSAET QHLNRETFKA VVAPNIVLIA KAFRQ
|
| Detection Method: | |
| Confidence: | 1.05 |
| Match: | 2amiA |
| Description: | Solution Structure Of The Calcium-loaded N-Terminal Sensor Domain Of Centrin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [207-305] |
1 11 21 31 41 51
| | | | | |
1 QFVIPDFTSF VKDIEDIYNR CKTNTLGKLA DYIPQLARYN PDSWGLSICT IDGQRFSIGD 60
61 VDVPFTLQSC SKPLTYAIAL EKLGPKVVHS YVGQEPSGR
|
| Detection Method: | |
| Confidence: | 49.522879 |
| Match: | 2dfwA |
| Description: | No description for 2dfwA was found. |
|
Region A: Residues: [306-716] |
1 11 21 31 41 51
| | | | | |
1 NFNELVLDQN KKPHNPMINA GAILTCSLMN ALVKPDMTSA EIFDYTMSWF KRLSGGEYIG 60
61 FNNAVFLSER EAADRNYALG FYMRENKCFP KRTNLKEVMD FYFQCCSMET NCEAMSVIAA 120
121 SLANGGICPT TEEKVFRPEV IRDVLSIMHS CGTYDYSGQF AFKVGLPAKS GVSGGMMLVI 180
181 PNVMGIFAWS PPLDHLGNTV RGLQFCEELV SMFNFHRYDN LKHLSNKKDP RKHRYETKGL 240
241 SIVNLLFSAA SGDVTALRRH RLSGMDITLA DYDGRTALHL AASEGHLECV KFLLEQCHVP 300
301 HNPKDRWGNL PVDEAENFGH CHVVEFLRSW AEKADQSSEE CKPEAVTSKT QADEEICSTS 360
361 DLETSPTTSP IPTPVESGSR AGSGRSSPVP SDAGSTASAG SSIDDKTKPG L
|
| Detection Method: | |
| Confidence: | 69.522879 |
| Match: | 1n11A |
| Description: | Ankyrin-R |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.69518662254742 | bayes_pls_golite062009 |
| protein binding | 1.62940095931841 | bayes_pls_golite062009 |
| transcription factor binding | 0.16045567443462 | bayes_pls_golite062009 |
