| Protein: | pds5-PA, FBpp0297204 |
| Organism: | Drosophila melanogaster |
| Length: | 1218 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pds5-PA, FBpp0297204.
| Description | E-value | Query Range |
Subject Range |
|
|
867.0 | [0..3] | [1217..104] |
|
Region A: Residues: [1-1033] |
1 11 21 31 41 51
| | | | | |
1 MADIVYPTGC RPLVEDLGTD ELIRRLKTLA NVLQTMDQDD NLYQQYIPLA LHLLDDFFMQ 60
61 HPSRDVQLLI ACCVADVLRV YAPEAPYKEQ DQIKTIFKFF IKQLHGLKDP RDPSFKRYFY 120
121 LLENLAFVKS FNMCFELEDC QEIFQDLFST IFKIVNDQHS VKVTNFFLDV LSPLITEADN 180
181 LSVELLDLIL INIVEPYKSN NKFACQLTEQ LLTKTGDALE STIKMFFNRA LVMDKPNTKL 240
241 SITNKIYDII YELNRINAGL LCSVLPQLEN KLLSTDDAER LKATTLLSRM FSEKDSQLAK 300
301 KYPNLLKIFF GRFCDITEPV RIKCVQSSMH FLLNHPSLQH DITEKLRLRN HDLDEVVRHE 360
361 VVMAIVETAK RDFTLVLEAP DLLEIVRERT LDKKYKIRRD AMNGLAYIYK RAICEPNDLS 420
421 TGLKVRVDWI KNKILHGYYK VGLEDRLLVE RLLITCLVPY KLAPEERMKK LYHLLGDLDA 480
481 NATKAFVELQ KNQMKTRNTV SDWIKLHHSK EFTPRVLSQL SAKQANIAKL LPDPLKAAEY 540
541 LTQFSNNLRK DAQLLRCINI VLKRDVSCRE CADTMGVLLK KLGAHVQSNL YYNTVKMLIE 600
601 RVASVMVDKE SIGVLISLIE QCIEKGSMCE EIGISAQEAG ERGLKLLAML SYVFSAHFFT 660
661 DTSLRHLISL LSYEQDYVAP LVLKTLTHLG RYQPLIDDPT PAILDELAPV CKDFALIGTP 720
721 KQAKHAVRCI FVNSQSSAST DGATSGAGSA STTTQTVHPI FNEIIETLRL KLTPNCEHQR 780
781 TKIVTLGHIA YNMPQAFLTP IKNMIARRIV KELLIQEVPA QRDYELPEDS DWCAQEKLPP 840
841 DTLCKLDALK AMARWLLGLR TDEHAAQKTF RMLAAFVNQR GDLLGQNRLC GAEKSWLRLG 900
901 AACAMLKVCE QKGVGDQYSA EQYLQLSQLM ADPVPEVREI FARKLHKGLS RSLPRNCLPL 960
961 DFMGLYVLAG LETERKLQDL VRHYAETDVN KRREYLKTVA MTSPDSSTES QSLHILPDYM1020
1021 LAFAIPVLVH DPR
|
| Detection Method: |  |
| Confidence: | 38.39794 |
| Match: | 1u6gC |
| Description: | Crystal Structure of The Cand1-Cul1-Roc1 Complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein transporter activity | 3.05338750264476 | bayes_pls_golite062009 |
| binding | 2.86831493830281 | bayes_pls_golite062009 |
| protein binding | 1.63705839411934 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.61037669901273 | bayes_pls_golite062009 |
| transporter activity | 1.55621630624352 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.33334123659384 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 1.15447282085461 | bayes_pls_golite062009 |
| actin binding | 0.891762677781115 | bayes_pls_golite062009 |
| nucleic acid binding | 0.804909841250605 | bayes_pls_golite062009 |
| signal sequence binding | 0.55352931702601 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.350388174853674 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.331309559699391 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.141331164449492 | bayes_pls_golite062009 |
| transcription regulator activity | 0.123389318446902 | bayes_pls_golite062009 |
| DNA binding | 0.089209424262799 | bayes_pls_golite062009 |
|
Region A: Residues: [1034-1141] |
1 11 21 31 41 51
| | | | | |
1 FTNHEDYVQL RKMEKCLRFI LEPLMAKRET FVHSFYKQLL QLIKHREFSL GSDKRDNYKM 60
61 WALCDLAMYI IDSKFSPFDG NTSTFSMPLA LPEMYYKEPA VANFQNND
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1142-1218] |
1 11 21 31 41 51
| | | | | |
1 VYIPLDVYTL GAKSTSKAAA TAMTTSRAAV APKRPAEQSI MDDENPQENN LFDNIRAADT 60
61 TEPMAKRTRA GAASAKS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
