| Protein: | FBpp0309831, lola-PI |
| Organism: | Drosophila melanogaster |
| Length: | 970 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0309831, lola-PI.
| Description | E-value | Query Range |
Subject Range |
|
|
728.0 | [0..293] | [968..342] |
|
Region A: Residues: [1-123] |
1 11 21 31 41 51
| | | | | |
1 MDDDQQFCLR WNNHQSTLIS VFDTLLENET LVDCTLAAEG KFLKAHKVVL SACSPYFATL 60
61 LQEQYDKHPI FILKDVKYQE LRAMMDYMYR GEVNISQDQL AALLKAAESL QIKGLSDNRT 120
121 GGG
|
| Detection Method: |  |
| Confidence: | 33.69897 |
| Match: | 2nn2A |
| Description: | No description for 2nn2A was found. |
|
Region A: Residues: [124-286] |
1 11 21 31 41 51
| | | | | |
1 VAPKPESSGH HRGGKLSGAY TLEQTKRARL ATGGAMDTSG DVSGSREGSS SPSRRRRKVR 60
61 RRSMENDAHD NSNSSVLQAA ASNQSILQQT GAGLAVSALV TTQLSSGPAA GTSSQASSTQ 120
121 QQQPLTSTNV TKKTESAKLT SSTAAPASGA SASAAVQQAH LHQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [287-465] |
1 11 21 31 41 51
| | | | | |
1 QQAQTTSDAI NTENVQAQSQ GGAQGVQGDD EDIDEGSAVG GPNSATGPNP ASASASAVHA 60
61 GVVVKQLASV VDKSSSNHKH KIKDNSVSSV GSEMVIEPKA EYDDDAHDEN VEDLTLDEED 120
121 MTMEELDQTA GTSQGGEGSS QTYATWQHDR SQDELGLMAQ DAQQRDPQAS KQDKGEQTE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [466-623] |
1 11 21 31 41 51
| | | | | |
1 GAQDEFELDD CLLESNDIVI TQNKDGFVLH VKKLGNITAA KLEENQAVAQ QQGQAAVTVT 60
61 GPAGQPTPTI TELLNAAAAS HSEPKPTLTT LTSTPIKLPS SECELINIKK IIPATTTIAT 120
121 HHPHTSSTII HPHHIIQHVS QEPHHQEHHQ QHQTIHIE
|
| Detection Method: | |
| Confidence: | 9.39794 |
| Match: | 1tf3A |
| Description: | Transcription factor IIIA, TFIIIA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.70988788192472 | bayes_pls_golite062009 |
| nucleic acid binding | 4.58713908116892 | bayes_pls_golite062009 |
| DNA binding | 4.56219307357342 | bayes_pls_golite062009 |
| transcription activator activity | 3.52873291636993 | bayes_pls_golite062009 |
| transcription factor activity | 3.50954949535763 | bayes_pls_golite062009 |
| transcription repressor activity | 3.27542149084008 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.22082323675675 | bayes_pls_golite062009 |
| binding | 3.10743787485868 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.53101891154822 | bayes_pls_golite062009 |
| chromatin binding | 2.18464662431232 | bayes_pls_golite062009 |
| protein binding | 2.05530362750351 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.63161912031789 | bayes_pls_golite062009 |
| transcription factor binding | 1.39608963544799 | bayes_pls_golite062009 |
| transcription corepressor activity | 1.34049786451995 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.77874411480713 | bayes_pls_golite062009 |
| catalytic activity | 0.245893663605433 | bayes_pls_golite062009 |
|
Region A: Residues: [624-720] |
1 11 21 31 41 51
| | | | | |
1 EVPQTSQQHH QQQHHHQLQT VQPTHTQVQS IITAHPGQTI NLVGLRNVQL ADSKPIASRI 60
61 RYSRGKIIGP TVQNLQIVET HEPIQHQHHE LSDGTKY
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [721-970] |
1 11 21 31 41 51
| | | | | |
1 EISEIDLNNP NASAAIISDL VKYAEIDDIE LPDGTKIGIG FAPSEITEHM QTSGGETHIT 60
61 TIEHEPQELQ TVHQHEQTQQ THHIHAGQLQ THHIQTVVQS SSGQQQHDQQ QHHQHHSIEL 120
121 QDDDGVETIT PEELGMHDSS KSYTILTTRP MKEESEHDPS GMTYELSLSD SSLGPCDDPE 180
181 SRYVCRHCGK KYRWKSTLRR HENVECGGKE PCHPCPYCSY KAKQRGNLGV HVRKHHPEKP 240
241 QLESKRGRKV
|
| Detection Method: | |
| Confidence: | 52.522879 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
