| Protein: | phr-PB |
| Organism: | Drosophila melanogaster |
| Length: | 535 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for phr-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
466.0 | [0..1] | [535..106] |
|
Region A: Residues: [1-94] |
1 11 21 31 41 51
| | | | | |
1 MKRTKAQKAG PSKKAAKNEK ASSEPKSDQE SSDEEASTSK ALLVSKPDYQ NFEQFLTHLE 60
61 HQRVCTAANI QEFSFRKKRV RVLSKTEDVK ESSL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [95-535] |
1 11 21 31 41 51
| | | | | |
1 GGVVYWMSRD GRVQDNWALL FAQRLALKLE LPLTVVFCLV PKFLNATIRH YKFMMGGLQE 60
61 VEQQCRALDI PFHLLMGSAV EKLPQFVKSK DIGAVVCDFA PLRLPRQWVE DVGKALPKSV 120
121 PLVQVDAHNV VPLWVASDKQ EYAARTIRNK INSKLGEYLS VFPPVVRHPH GTGCKNVNTV 180
181 DWSAAYASLQ CDMEVDEVQW AKPGYKAACQ QLYEFCSRRL RHFNDKRNDP TADALSGLSP 240
241 WLHFGHISAQ RCALEVQRFR GQHKASADAF CEEAIVRREL ADNFCFYNEH YDSLKGLSSW 300
301 AYQTLDAHRK DKRDPCYSLE ELEKSLTYDD LWNSAQLQLV REGKMHGFLR MYWAKKILEW 360
361 TATPEHALEY AILLNDKYSL DGRDPNGYVG CMWSIGGVHD MGWKERAIFG KVRYMNYQGC 420
421 RRKFDVNAFV MRYGGKVHKK K
|
| Detection Method: | |
| Confidence: | 98.0 |
| Match: | 1dnpA |
| Description: | C-terminal domain of DNA photolyase; DNA photolyase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA photolyase activity | 2.69544443093614 | bayes_pls_golite062009 |
| deoxyribodipyrimidine photo-lyase activity | 2.01343813518186 | bayes_pls_golite062009 |
| binding | 0.638180097229557 | bayes_pls_golite062009 |
| catalytic activity | 0.609980967042895 | bayes_pls_golite062009 |
| transcription regulator activity | 0.168445004685844 | bayes_pls_golite062009 |
| transcription repressor activity | 0.143448587511534 | bayes_pls_golite062009 |
