| Protein: | Taf11-PA |
| Organism: | Drosophila melanogaster |
| Length: | 196 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Taf11-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
229.0 | [0..1] | [196..1] |
|
|
213.0 | [0..32] | [193..76] |
|
|
208.0 | [0..12] | [193..34] |
|
|
206.0 | [0..16] | [193..40] |
|
|
206.0 | [0..16] | [193..40] |
|
Region A: Residues: [1-78] |
1 11 21 31 41 51
| | | | | |
1 MDEILFPTQQ KSNSLSDGDD VDLKFFQSAS GERKDSDTSD PGNDADRDGK DADGDNDNKN 60
61 TDGDGDSGEP AHKKLKTK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [79-196] |
1 11 21 31 41 51
| | | | | |
1 KELEEEERER MQVLVSNFTE EQLDRYEMYR RSAFPKAAVK RLMQTITGCS VSQNVVIAMS 60
61 GIAKVFVGEV VEEALDVMEA QGESGALQPK FIREAVRRLR TKDRMPIGRY QQPYFRLN
|
| Detection Method: | |
| Confidence: | 41.154902 |
| Match: | 1bh8B |
| Description: | TAF(II)28 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| general RNA polymerase II transcription factor activity | 9.25279783093877 | bayes_pls_golite062009 |
| DNA binding | 4.49118409263799 | bayes_pls_golite062009 |
| nucleic acid binding | 4.35201412176948 | bayes_pls_golite062009 |
| transcription regulator activity | 4.08606081850613 | bayes_pls_golite062009 |
| transcription initiation factor activity | 3.96621818094279 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.28941584139552 | bayes_pls_golite062009 |
| binding | 3.27510691458843 | bayes_pls_golite062009 |
| transcription factor activity | 2.51581622888695 | bayes_pls_golite062009 |
| transcription activator activity | 1.25487495162413 | bayes_pls_golite062009 |
| transcription factor binding | 1.15204005455906 | bayes_pls_golite062009 |
| transcription coactivator activity | 1.1297723528047 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.10331930589736 | bayes_pls_golite062009 |
| protein binding | 1.07873333188144 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.01502031330902 | bayes_pls_golite062009 |
| transcription repressor activity | 0.72554769377984 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.0852726470007639 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.0792897588268993 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.0736756545988504 | bayes_pls_golite062009 |
