| Protein: | gi|120603279, gi... |
| Organism: | Desulfovibrio vulgaris DP4 |
| Length: | 503 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|120603279, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..500] | [1..500] |
|
|
0.0 | [1..499] | [3..505] |
|
|
0.0 | [2..499] | [5..502] |
|
|
0.0 | [3..499] | [11..508] |
|
|
0.0 | [2..500] | [12..515] |
|
|
0.0 | [1..501] | [1..502] |
|
|
0.0 | [3..498] | [6..500] |
|
|
0.0 | [3..498] | [8..505] |
|
|
0.0 | [2..502] | [13..512] |
|
|
0.0 | [3..500] | [7..505] |
|
Region A: Residues: [1-253] |
1 11 21 31 41 51
| | | | | |
1 MKVYLIGAGP GDPGLLTLKG KEILERADVV VYDFLANDAF LAYAKPDAEI IYVGKKGGDH 60
61 TLSQDGINRL IIEKAKEGKV VARLKGGDPY MFGRGGEEAE ELLDAGVPFE EVPGVTSAIA 120
121 GPAYAGIPLT HRSYASSVSF ITGHENPDKP DSAHNWQALA AGTSTLVFFM GMKNLPDISR 180
181 KLIAAGMSPD KPAALVRWGT TPRHRSLVAT IATLPEEAVK HGFSNPSLIV VGDVVRLRDR 240
241 LNWFEHKPLL GKG
|
| Detection Method: |  |
| Confidence: | 62.0 |
| Match: | 1pjqA |
| Description: | Structure and function of CysG, the multifunctional methyltransferase/dehydrogenase/ferrochelatase for siroheme synthesis |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| uroporphyrin-III C-methyltransferase activity | 3.573271502205 | bayes_pls_golite062009 |
| C-methyltransferase activity | 3.35393353163232 | bayes_pls_golite062009 |
| precorrin-4 C11-methyltransferase activity | 2.18371138649366 | bayes_pls_golite062009 |
| catalytic activity | 1.48349578618275 | bayes_pls_golite062009 |
| transferase activity | 0.912524944496351 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.431791521097299 | bayes_pls_golite062009 |
| methyltransferase activity | 0.424918406685891 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 0.28351517300952 | bayes_pls_golite062009 |
| uroporphyrinogen-III synthase activity | 0.00871858903098705 | bayes_pls_golite062009 |
|
Region A: Residues: [254-503] |
1 11 21 31 41 51
| | | | | |
1 VVVTRAREQA SGLAAALREL GADVIQFPTI DIHPLDDYAP VHEAIRALDT YDWVVFTSVN 60
61 GVKHFWNQLA ALGLDSRALG GRKVAAIGPA TADALRDKGI APDFIPEKYV AEGVVEGMLA 120
121 RGMGGKRVLL PRALEAREVL PEELRKAGAT VDVLPVYVTV PSAARRDDVL ARMEAGEVHC 180
181 VTFGSSSTVE NFFSLVPADT VKAHPEVKLA CIGPVTKKTL EGFGFTCHIQ PDDYTIPALV 240
241 DELTRVLPEL
|
| Detection Method: | |
| Confidence: | 41.0 |
| Match: | 1jr2A |
| Description: | Uroporphyrinogen III synthase (U3S, HemD) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| uroporphyrinogen-III synthase activity | 3.34629127241283 | bayes_pls_golite062009 |
| catalytic activity | 1.13824203225664 | bayes_pls_golite062009 |
| lyase activity | 0.352588988142348 | bayes_pls_golite062009 |
| hydro-lyase activity | 0.290711782955013 | bayes_pls_golite062009 |
| carbon-oxygen lyase activity | 0.212880565996123 | bayes_pls_golite062009 |
