| Protein: | gi|208966240, gi... |
| Organism: | synthetic construct |
| Length: | 293 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|208966240, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
6.0E-88 | [1..292] | [1..292] |
|
|
3.0E-85 | [1..293] | [1..293] |
|
|
1.0E-84 | [1..293] | [1..293] |
|
|
4.0E-84 | [1..293] | [1..293] |
|
|
2.0E-83 | [1..293] | [1..293] |
|
|
6.0E-82 | [1..293] | [1..285] |
|
|
8.0E-76 | [1..292] | [1..292] |
|
|
3.0E-75 | [1..293] | [1..293] |
|
Region A: Residues: [1-293] |
1 11 21 31 41 51
| | | | | |
1 MAMEMRLPVA RKPLSERLGR DTKKHLVVPG DTITTDTGFM RGHGTYMGEE KLIASVAGSV 60
61 ERVNKLICVK ALKTRYIGEV GDIVVGRITE VQQKRWKVET NSRLDSVLLL SSMNLPGGEL 120
121 RRRSAEDELA MRGFLQEGDL ISAEVQAVFS DGAVSLHTRS LKYGKLGQGV LVQVSPSLVK 180
181 RQKTHFHDLP CGASVILGNN GFIWIYPTPE HKEEEAGGFI ANLEPVSLAD REVISRLRNC 240
241 IISLVTQRMM LYDTSILYCY EASLPHQIKD ILKPEIMEEI VMETRQRLLE QEG
|
| Detection Method: |  |
| Confidence: | 88.0 |
| Match: | 2nn6H |
| Description: | No description for 2nn6H was found. |
| Term | Confidence | Notes |
| RNA binding | 5.18414740305744 | bayes_pls_golite062009 |
| exoribonuclease activity | 4.57899887224013 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 4.54136587416505 | bayes_pls_golite062009 |
| ribonuclease activity | 4.53127626527286 | bayes_pls_golite062009 |
| structural constituent of ribosome | 3.89236528662255 | bayes_pls_golite062009 |
| mRNA binding | 3.82977088614136 | bayes_pls_golite062009 |
| nucleic acid binding | 3.68444148122352 | bayes_pls_golite062009 |
| structural molecule activity | 3.54418030121155 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 3.40736445988244 | bayes_pls_golite062009 |
| binding | 2.8667878224392 | bayes_pls_golite062009 |
| 1.63970610538963 | bayes_pls_golite062009 | |
| hydrolase activity, acting on ester bonds | 1.62417180482862 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 1.55351486913613 | bayes_pls_golite062009 |
| transcription regulator activity | 1.43703138180882 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 1.42151567812515 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 1.35850109411274 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 1.35845277283398 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 1.35845277283398 | bayes_pls_golite062009 |
| exonuclease activity | 1.25488463068335 | bayes_pls_golite062009 |
| DNA binding | 1.20852534725468 | bayes_pls_golite062009 |
| exoribonuclease II activity | 1.18248519339188 | bayes_pls_golite062009 |
| protein binding | 0.934192915895039 | bayes_pls_golite062009 |
| hydrolase activity | 0.704891843968224 | bayes_pls_golite062009 |
| mRNA 3'-UTR binding | 0.489176583045793 | bayes_pls_golite062009 |
| transcription factor activity | 0.386248501195543 | bayes_pls_golite062009 |
| ligase activity | 0.346041081217685 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.32222928997178 | bayes_pls_golite062009 |
| poly-pyrimidine tract binding | 0.30467150200016 | bayes_pls_golite062009 |
| catalytic activity | 0.161830442565647 | bayes_pls_golite062009 |
| aspartate-tRNA ligase activity | 0.151650064901878 | bayes_pls_golite062009 |
| translation initiation factor activity | 0.11625379846973 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.1069917291606 | bayes_pls_golite062009 |
| DNA-directed RNA polymerase activity | 0.0740938021136293 | bayes_pls_golite062009 |
| RNA polymerase activity | 0.0740938021136293 | bayes_pls_golite062009 |
