| Protein: | gi|208967094, gi... |
| Organism: | synthetic construct |
| Length: | 316 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|208967094, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..316] | [56..371] |
|
|
0.0 | [1..316] | [1..316] |
|
|
0.0 | [1..316] | [1..316] |
|
|
0.0 | [1..316] | [1..316] |
|
|
0.0 | [1..316] | [1..316] |
|
|
0.0 | [1..316] | [1..323] |
|
|
0.0 | [1..316] | [1..323] |
|
|
0.0 | [1..316] | [31..344] |
|
Region A: Residues: [1-67] |
1 11 21 31 41 51
| | | | | |
1 MAEVKVKVQP PDADPVEIEN RIIELCHQFP HGITDQVIQN EMPHIEAQQR AVAINRLLSM 60
61 GQLDLLR
|
| Detection Method: |  |
| Confidence: | 23.69897 |
| Match: | 2dk8A |
| Description: | No description for 2dk8A was found. |
| Term | Confidence | Notes |
| transcription regulator activity | 5.55329976718261 | bayes_pls_golite062009 |
| DNA binding | 5.08959163553491 | bayes_pls_golite062009 |
| nucleic acid binding | 4.99681957904233 | bayes_pls_golite062009 |
| RNA polymerase activity | 4.38040357248614 | bayes_pls_golite062009 |
| DNA-directed RNA polymerase activity | 4.38040357248614 | bayes_pls_golite062009 |
| transcription factor activity | 4.33152142980289 | bayes_pls_golite062009 |
| binding | 3.52874320222492 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 2.80876790343695 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.48053910222825 | bayes_pls_golite062009 |
| transcription activator activity | 2.37668609508629 | bayes_pls_golite062009 |
| transcription repressor activity | 2.22485867684613 | bayes_pls_golite062009 |
| transferase activity | 2.17455387041569 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 2.13327310661537 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.70025468248325 | bayes_pls_golite062009 |
| transcription factor binding | 0.85714789329232 | bayes_pls_golite062009 |
| protein binding | 0.753698599635855 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.461477365615935 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.0856082199488197 | bayes_pls_golite062009 |
|
Region A: Residues: [68-142] |
1 11 21 31 41 51
| | | | | |
1 SNTGLLYRIK DSQNAGKMKG SDNQEKLVYQ IIEDAGNKGI WSRDIRYKSN LPLTEINKIL 60
61 KNLESKKLIK AVKSV
|
| Detection Method: | |
| Confidence: | 27.522879 |
| Match: | 2yu3A |
| Description: | No description for 2yu3A was found. |
|
Region A: Residues: [143-316] |
1 11 21 31 41 51
| | | | | |
1 AASKKKVYML YNLQPDRSVT GGAWYSDQDF ESEFVEVLNQ QCFKFLQSKA ETARESKQNP 60
61 MIQRNSSFAS SHEVWKYICE LGISKVELSM EDIETILNTL IYDGKVEMTI IAAKEGTVGS 120
121 VDGHMKLYRA VNPIIPPTGL VRAPCGLCPV FDDCHEGGEI SPSNCIYMTE WLEF
|
| Detection Method: | |
| Confidence: | 57.79588 |
| Match: | PF05158.3 |
| Description: | No description for PF05158.3 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
