| Protein: | gi|126941860, gi... |
| Organism: | Listeria monocytogenes J0161 |
| Length: | 453 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|126941860, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
413.0 | [0..1] | [453..1] |
|
|
411.0 | [0..1] | [453..1] |
|
|
406.0 | [0..1] | [451..1] |
|
|
391.0 | [0..3] | [452..1] |
|
|
388.0 | [0..4] | [451..6] |
|
|
386.0 | [0..1] | [450..5] |
|
|
386.0 | [0..1] | [450..5] |
|
|
386.0 | [0..3] | [449..4] |
|
|
386.0 | [0..1] | [452..5] |
|
|
386.0 | [0..1] | [450..5] |
|
Region A: Residues: [1-453] |
1 11 21 31 41 51
| | | | | |
1 MEASLLKKNQ SIELTIEDLT HDGSGVGKID GYPFFIPNTL PGEKVTAKII KLNKNYGFAR 60
61 MENIETVSAN RVEPPCAVYS KCGGCSLQHL SYDGQLEFKR NQVEETMKRI GKLNVEVPET 120
121 LGMENPWRYR NKSQVPVGFV NGKLTAGFYQ KRSHAIIDMS TCLIHNEQGD FAVQKTREIL 180
181 AKYGTEPYDE QTGKGDIRHI MTRFAHTTGQ LMIVLVTTKE RMPFKEEIVR DLVEQLELTS 240
241 IVQNINPHKT NVIFGDRTKT LWGKDIIEDT IHGIRFAISA RSFYQVNPLQ TEVLYQQAID 300
301 AAELTGEETV IDAYCGIGSI SLCLAKKAKH VYGVEIVDQA IQDARANAEL NELANTTFET 360
361 GKAEEVIPSW YKAGIVADVL VVDPPRKGCD EKLLETILAM KPKKVVYVSC NPGTLARDMK 420
421 ILTDGGYVAK KVQPVDMFPM TTHIEAVTVL HLN
|
| Detection Method: |  |
| Confidence: | 79.30103 |
| Match: | 1uwvA |
| Description: | Crystal Structure of RumA, the iron-sulfur cluster containing E. coli 23S Ribosomal RNA 5-Methyluridine Methyltransferase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| methyltransferase activity | 4.15445027778357 | bayes_pls_golite062009 |
| rRNA methyltransferase activity | 4.09362182773099 | bayes_pls_golite062009 |
| N-methyltransferase activity | 4.07806017452628 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 4.07153733729662 | bayes_pls_golite062009 |
| protein methyltransferase activity | 3.92746815303714 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 3.39429041855776 | bayes_pls_golite062009 |
| RNA methyltransferase activity | 3.07428840534971 | bayes_pls_golite062009 |
| histone methyltransferase activity | 2.99461585647365 | bayes_pls_golite062009 |
| tRNA methyltransferase activity | 2.5931020126592 | bayes_pls_golite062009 |
| arginine N-methyltransferase activity | 2.41876112831625 | bayes_pls_golite062009 |
| protein-arginine N-methyltransferase activity | 2.41876112831625 | bayes_pls_golite062009 |
| transferase activity | 2.22303238506686 | bayes_pls_golite062009 |
| DNA-methyltransferase activity | 2.18991764495147 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 2.04350689362549 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 2.04350689362549 | bayes_pls_golite062009 |
| histone-arginine N-methyltransferase activity | 2.04296107639729 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 2.04218282227834 | bayes_pls_golite062009 |
| tRNA (cytosine)-methyltransferase activity | 1.88889414729709 | bayes_pls_golite062009 |
| tRNA (cytosine-5-)-methyltransferase activity | 1.88889414729709 | bayes_pls_golite062009 |
| rRNA (adenine) methyltransferase activity | 1.83964463328968 | bayes_pls_golite062009 |
| rRNA (adenine-N6,N6-)-dimethyltransferase activity | 1.75675289134467 | bayes_pls_golite062009 |
| protein-arginine omega-N monomethyltransferase activity | 1.66871163498737 | bayes_pls_golite062009 |
| tRNA (adenine-N1-)-methyltransferase activity | 1.29759910099835 | bayes_pls_golite062009 |
| tRNA (adenine)-methyltransferase activity | 1.29759910099835 | bayes_pls_golite062009 |
| catalytic activity | 1.25333584501255 | bayes_pls_golite062009 |
| histone methyltransferase activity (H4-R3 specific) | 1.1103522853299 | bayes_pls_golite062009 |
| rRNA (guanine) methyltransferase activity | 1.10713374933008 | bayes_pls_golite062009 |
| ligase activity | 1.06979791212194 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.97496043954059 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.943661008731946 | bayes_pls_golite062009 |
| transcription regulator activity | 0.914549843668268 | bayes_pls_golite062009 |
| protein-arginine omega-N asymmetric methyltransferase activity | 0.89325812193225 | bayes_pls_golite062009 |
| DNA binding | 0.86027591375666 | bayes_pls_golite062009 |
| site-specific DNA-methyltransferase (adenine-specific) activity | 0.703178429468566 | bayes_pls_golite062009 |
| ribonuclease activity | 0.702449673647117 | bayes_pls_golite062009 |
| nucleic acid binding | 0.616949327277483 | bayes_pls_golite062009 |
| structural molecule activity | 0.596857566298868 | bayes_pls_golite062009 |
| aspartate-tRNA ligase activity | 0.504302440847948 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 0.449277083957511 | bayes_pls_golite062009 |
| RNA binding | 0.417524996559564 | bayes_pls_golite062009 |
| exoribonuclease activity | 0.40223812695012 | bayes_pls_golite062009 |
| binding | 0.383237930789959 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.32084431704638 | bayes_pls_golite062009 |
| transcription factor activity | 0.298729064067577 | bayes_pls_golite062009 |
| O-methyltransferase activity | 0.250946859465502 | bayes_pls_golite062009 |
| rRNA (guanine-N1-)-methyltransferase activity | 0.234572322347698 | bayes_pls_golite062009 |
| translation regulator activity | 0.22908707234671 | bayes_pls_golite062009 |
| tRNA (guanine) methyltransferase activity | 0.203168546434167 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.179682348023561 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 0.13299060447839 | bayes_pls_golite062009 |
