| Protein: | C209D_MOUSE |
| Organism: | Mus musculus |
| Length: | 237 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for C209D_MOUSE.
| Description | E-value | Query Range |
Subject Range |
|
|
183.0 | [0..1] | [237..1] |
|
|
179.0 | [0..1] | [237..1] |
|
|
175.0 | [0..1] | [232..1] |
|
|
174.0 | [0..1] | [235..1] |
|
|
173.0 | [0..5] | [232..201] |
|
|
173.0 | [0..4] | [235..187] |
|
Region A: Residues: [1-237] |
1 11 21 31 41 51
| | | | | |
1 MSDSMESKTQ QVVIPEDEEC LMSGTRYSDI SSRLQTKFGI KSLAEYTKQS RNPLVLQLLS 60
61 FLFLAGLLLI ILILVSKVPS SEVQNKIYQE LMQLKAEVHD GLCQPCARDW TFFNGSCYFF 120
121 SKSQRNWHNS TTACQELGAQ LVIIETDEEQ TFLQQTSKAR GPTWMGLSDM HNEATWHWVD 180
181 GSPLSPSFTR YWNRGEPNNV GDEDCAEFSG DGWNDLSCDK LLFWICKKVS TSSCTTK
|
| Detection Method: |  |
| Confidence: | 33.69897 |
| Match: | 1sl6A |
| Description: | Crystal Structure of a fragment of DC-SIGNR (containg the carbohydrate recognition domain and two repeats of the neck) complexed with Lewis-x. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| monosaccharide binding | 3.11313573656236 | bayes_pls_golite062009 |
| carbohydrate binding | 2.63424321036563 | bayes_pls_golite062009 |
| receptor activity | 2.50780218421666 | bayes_pls_golite062009 |
| transmembrane receptor activity | 2.25703667932839 | bayes_pls_golite062009 |
| hyaluronic acid binding | 2.24101091318298 | bayes_pls_golite062009 |
| molecular transducer activity | 2.04530361540349 | bayes_pls_golite062009 |
| signal transducer activity | 2.04530361540349 | bayes_pls_golite062009 |
| mannose binding | 2.02769829616516 | bayes_pls_golite062009 |
| polysaccharide binding | 2.00647699969727 | bayes_pls_golite062009 |
| pattern binding | 1.93929977823971 | bayes_pls_golite062009 |
| fucose binding | 1.84048523146965 | bayes_pls_golite062009 |
| binding | 1.83602918816086 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 1.74017863387581 | bayes_pls_golite062009 |
| antigen binding | 1.69692361913389 | bayes_pls_golite062009 |
| peptide antigen binding | 1.21587238898951 | bayes_pls_golite062009 |
| sugar binding | 1.08373701017943 | bayes_pls_golite062009 |
| calcium-dependent protein binding | 1.03810546168048 | bayes_pls_golite062009 |
| zymosan receptor activity | 0.943014275506551 | bayes_pls_golite062009 |
| MHC class Ib receptor activity | 0.943014275506551 | bayes_pls_golite062009 |
| polysaccharide receptor activity | 0.943014275506551 | bayes_pls_golite062009 |
| cell surface binding | 0.847091868125047 | bayes_pls_golite062009 |
| protein binding | 0.778335313480154 | bayes_pls_golite062009 |
| natural killer cell receptor activity | 0.726020405011931 | bayes_pls_golite062009 |
| receptor binding | 0.63610471733499 | bayes_pls_golite062009 |
| calcium ion binding | 0.409714138901478 | bayes_pls_golite062009 |
| sialic acid binding | 0.320555870924401 | bayes_pls_golite062009 |
| eukaryotic cell surface binding | 0.21157949111795 | bayes_pls_golite062009 |
| natural killer cell lectin-like receptor binding | 0.204348795793981 | bayes_pls_golite062009 |
| catalytic activity | 0.10160549859022 | bayes_pls_golite062009 |
| 0.0947750414934809 | bayes_pls_golite062009 |
