| Protein: | CE39207 |
| Organism: | Caenorhabditis elegans |
| Length: | 738 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE39207.
| Description | E-value | Query Range |
Subject Range |
|
|
691.0 | [0..27] | [737..4] |
|
Region A: Residues: [1-738] |
1 11 21 31 41 51
| | | | | |
1 MKLSRLPIHI SKRFHTKEYR LAGREQSVAV DFDGKSGIEL KAGHLARFAS STVVASFGDN 60
61 AVMATVVQRK SKQGDGSGVP LQVEYRPSAS AIGRIPTNFL RRELSQSDNE ILISRAIDRS 120
121 IRPLLPGNSY ETQIICKPLA LDENADQIML GINAASTALQ ISSAAYNGPL AALRVARTAR 180
181 GDFHVNPTQE ELREASLNLI VAMRKHEKTV MIELDGRESS AEHLEHALDV AFRHVAKLHE 240
241 AMEQLTAEPK DELASEDFSG LERLLEETAR ERIYYVITDA GHDKISRDME IKAIFEEICA 300
301 EKAFQTCEKD AIYRTYSTLV KKVLRDTTLR TGIRCDGRRP DEFRPITIHV DMYKKLHGCS 360
361 IFQRGQTQVM STVTFDSPAA AFHPDSVAQL LGSQRKKSFM LHYEFPGFAI NEFGTTRSLN 420
421 RREIGHGALA EKSLKNLFPA DFPYATRLAC QVLESNGSSS MASVCGGSLA LFDAGVPMKN 480
481 AAAGVAIGLI SDEAEPETKY RVLTDILGIE DYAGDMDFKV AGTRDGFTAA QLDVKNGGLT 540
541 RRQLTESLQA ARAGIDHVLQ KMSVMRDRPR EQFKPTVPII QSMRIEPHKR VTLFRNNGYN 600
601 CKLIEAETGV KISAEDEAHI SLLAQDKEKL QKAMDMMNDV LESNSTLDFA FGSIVQAEIV 660
661 EIIERGVYLT LPGSSRRIFM SNNHLSLNPV RHPDVLGLKI GDKMSVHWFG RDEHTGNIRL 720
721 SRKTLAGAKT PATSQKKK
|
| Detection Method: |  |
| Confidence: | 152.0 |
| Match: | 1e3hA |
| Description: | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 1 and 4; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 6; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ribonuclease activity | 3.62650207668685 | bayes_pls_golite062009 |
| exoribonuclease activity | 2.49584565422948 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 2.48625785660839 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 2.46667410843173 | bayes_pls_golite062009 |
| RNA binding | 1.54417931838494 | bayes_pls_golite062009 |
| hydrolase activity | 1.18773479836745 | bayes_pls_golite062009 |
| transcription termination factor activity | 1.01993495617192 | bayes_pls_golite062009 |
| catalytic activity | 0.878454819018611 | bayes_pls_golite062009 |
| binding | 0.872512498570204 | bayes_pls_golite062009 |
| ATP-dependent peptidase activity | 0.66778558090199 | bayes_pls_golite062009 |
| nucleic acid binding | 0.666538467028341 | bayes_pls_golite062009 |
| mRNA binding | 0.6661659753234 | bayes_pls_golite062009 |
| transcription regulator activity | 0.609202649585287 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.59064223556107 | bayes_pls_golite062009 |
| carbohydrate kinase activity | 0.51810239718467 | bayes_pls_golite062009 |
| 0.416217645025381 | bayes_pls_golite062009 | |
| structural molecule activity | 0.36020344477758 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.348601923227652 | bayes_pls_golite062009 |
| nuclease activity | 0.262228287184671 | bayes_pls_golite062009 |
| DNA binding | 0.237793607944966 | bayes_pls_golite062009 |
| protein binding | 0.0913090112555771 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.0287026367466632 | bayes_pls_golite062009 |
