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View Structure Prediction Details

Protein: TAF10_SCHPO
Organism: Schizosaccharomyces pombe 972h-
Length: 215 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TAF10_SCHPO.

Description E-value Query
Range
Subject
Range
gi|44985712, gi|... - gi|45200942|ref|NP_986512.1| AGL155Wp [Ashbya gossypii ATCC 10895], gi|44985712|gb|AAS54336.1| AGL15...
gi|44985712 - gi|44985712|gb|AAS54336.1| AGL155Wp [Ashbya gossypii ATCC 10895]
223.0 [0..29] [215..1]
gi|94388500, gi|... - gi|94389528|ref|XP_994512.1| PREDICTED: similar to TAF10 RNA polymerase II, TATA box binding protein...
219.0 [0..34] [214..57]
gi|76635972, gi|... - gi|76635972|ref|XP_884376.1| PREDICTED: similar to TAF10 RNA polymerase II, TATA box binding protein...
218.0 [0..44] [214..67]
gi|109107476 - gi|109107476|ref|XP_001109210.1| PREDICTED: similar to Transcription initiation factor TFIID subunit...
215.0 [0..44] [214..67]
gi|61363275, gi|... - gi|61363578|gb|AAX42413.1| TAF10 RNA polymerase II TATA box binding protein-associated factor [synth...
TAF10 - TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa
215.0 [0..44] [214..67]
gi|73988322 - gi|73988322|ref|XP_542454.2| PREDICTED: similar to Transcription initiation factor TFIID subunit 10 ...
209.0 [0..44] [214..67]

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Predicted Domain #1
Region A:
Residues: [1-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDINNNEPA ENIEQPKQEP EDGNNSMSVD EQPETSSTNL PTGDNLAPMS VESPAHLNNE  60
   61 DSPKSDDSRE RHGSNYVIEP HLELRDMAKD KTLENFLAQM DDYSPLIPDV LLDYYLSLSG 120
  121 FKCVDPRLKK LLGLTAQKFI SDVAQDAYQY SKIRTGSSNA SSTTFGAQNF GAGGASGIGS 180
  181 SGRRGDRGKT VLTVDDLSAA LNEYGINLKR PDFFR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.07
Match: 1f1eA
Description: Archaeal histone
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
general RNA polymerase II transcription factor activity 8.88482968293417 bayes_pls_golite062009
lysine N-acetyltransferase activity 5.93249134612505 bayes_pls_golite062009
histone acetyltransferase activity 5.93249134612505 bayes_pls_golite062009
N-acetyltransferase activity 4.49084162254966 bayes_pls_golite062009
N-acyltransferase activity 4.2172829451557 bayes_pls_golite062009
DNA binding 4.00167809338753 bayes_pls_golite062009
transcription regulator activity 3.91807454227165 bayes_pls_golite062009
acetyltransferase activity 3.91533222675137 bayes_pls_golite062009
transcription initiation factor activity 3.78067108255869 bayes_pls_golite062009
nucleic acid binding 3.72299085850948 bayes_pls_golite062009
binding 3.67149228723241 bayes_pls_golite062009
acyltransferase activity 3.38996237245502 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 3.35419529667223 bayes_pls_golite062009
transferase activity, transferring acyl groups 3.18312128320637 bayes_pls_golite062009
RNA polymerase II transcription factor activity 3.02428691626433 bayes_pls_golite062009
transcription factor activity 2.18855864512878 bayes_pls_golite062009
protein binding 1.22636497573761 bayes_pls_golite062009
transcription activator activity 1.12739348005764 bayes_pls_golite062009
nucleotidyltransferase activity 1.03060091158028 bayes_pls_golite062009
transcription factor binding 1.01773884290535 bayes_pls_golite062009
transcription coactivator activity 0.976797801726735 bayes_pls_golite062009
transcription cofactor activity 0.840442755533537 bayes_pls_golite062009
centromeric DNA binding 0.733005766998027 bayes_pls_golite062009
transcription repressor activity 0.621482805601238 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.450418553112188 bayes_pls_golite062009
histone binding 0.184823910505751 bayes_pls_golite062009
transferase activity 0.137803992484684 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle