| Protein: | RET1_MOUSE |
| Organism: | Mus musculus |
| Length: | 135 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RET1_MOUSE.
| Description | E-value | Query Range |
Subject Range |
|
|
198.0 | [0..1] | [135..63] |
|
|
183.0 | [0..1] | [135..1] |
|
|
181.0 | [0..2] | [135..1] |
|
|
179.0 | [0..1] | [135..1] |
|
|
176.0 | [0..1] | [135..1] |
|
|
176.0 | [0..1] | [135..1] |
|
|
176.0 | [0..1] | [135..1] |
|
Region A: Residues: [1-135] |
1 11 21 31 41 51
| | | | | |
1 MPVDFNGYWK MLSNENFEEY LRALDVNVAL RKIANLLKPD KEIVQDGDHM IIRTLSTFRN 60
61 YIMDFQVGKE FEEDLTGIDD RKCMTTVSWD GDKLQCVQKG EKEGRGWTQW IEGDELHLEM 120
121 RAEGVICKQV FKKVH
|
| Detection Method: |  |
| Confidence: | 47.0 |
| Match: | 1jbhA |
| Description: | Cellular retinol-binding protein II (CRBP) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| long-chain fatty acid transporter activity | 5.31242454679135 | bayes_pls_golite062009 |
| fatty acid transporter activity | 5.05947161650978 | bayes_pls_golite062009 |
| lipid transporter activity | 4.30505384117861 | bayes_pls_golite062009 |
| retinoid binding | 3.86745158299736 | bayes_pls_golite062009 |
| isoprenoid binding | 3.80802424204178 | bayes_pls_golite062009 |
| lysophospholipid transporter activity | 3.53484598441971 | bayes_pls_golite062009 |
| retinol binding | 3.41359399354212 | bayes_pls_golite062009 |
| binding | 2.93830472620404 | bayes_pls_golite062009 |
| transcription regulator activity | 2.27413749831465 | bayes_pls_golite062009 |
| transporter activity | 2.15627660314839 | bayes_pls_golite062009 |
| transcription repressor activity | 1.45696778890481 | bayes_pls_golite062009 |
| protein binding | 1.23450129884619 | bayes_pls_golite062009 |
| prostaglandin-D synthase activity | 1.18764036773412 | bayes_pls_golite062009 |
| lipid binding | 1.0002255159651 | bayes_pls_golite062009 |
| retinol transporter activity | 0.811095267558536 | bayes_pls_golite062009 |
| fatty acid binding | 0.761923641769607 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.670647472301401 | bayes_pls_golite062009 |
| retinoic acid binding | 0.539496110498594 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity | 0.50851501669551 | bayes_pls_golite062009 |
| bile acid binding | 0.37501307074598 | bayes_pls_golite062009 |
