YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: S100B_MOUSE
Organism: Mus musculus
Length: 92 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for S100B_MOUSE.

Description E-value Query
Range
Subject
Range
gi|76612513 - gi|76612513|ref|XP_595126.2| PREDICTED: similar to Calgizzarin (S100 calcium-binding protein A11) (S...
114.0 [0..2] [91..87]
gi|109016674 - gi|109016674|ref|XP_001108718.1| PREDICTED: similar to Protein S100-A11 (S100 calcium-binding protei...
113.0 [0..2] [91..441]
gi|109504576 - gi|109504576|ref|XP_225088.3| PREDICTED: similar to S100 calcium binding protein A11 [Rattus norvegi...
108.0 [0..3] [91..64]
gi|50748592 - gi|50748592|ref|XP_421316.1| PREDICTED: similar to calmodulin 1; Calmodulin 1 (phosphorylase kinase,...
107.0 [0..1] [79..587]
gi|34811430, gi|... - gi|34811430|pdb|1NSH|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models), gi|34811429|pd...
107.0 [0..2] [91..4]
gi|60829601, gi|... - gi|61371878|gb|AAX43748.1| S100 calcium binding protein A11 [synthetic construct], gi|61369077|gb|AA...
103.0 [0..2] [91..8]

Back

Predicted Domain #1
Region A:
Residues: [1-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSELEKAMVA LIDVFHQYSG REGDKHKLKK SELKELINNE LSHFLEEIKE QEVVDKVMET  60
   61 LDEDGDGECD FQEFMAFVAM VTTACHEFFE HE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.30103
Match: 1cfpA
Description: Calcyclin (S100)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
S100 alpha binding 4.10422481094917 bayes_pls_golite062009
binding 3.17556402087346 bayes_pls_golite062009
metal ion binding 2.62077305565026 bayes_pls_golite062009
cation binding 2.62077305565026 bayes_pls_golite062009
ion binding 2.61312132078717 bayes_pls_golite062009
calcium-dependent protein binding 2.41193763776922 bayes_pls_golite062009
transcription regulator activity 2.23156041569913 bayes_pls_golite062009
protein binding 2.21291432166051 bayes_pls_golite062009
nucleic acid binding 1.83723964306928 bayes_pls_golite062009
DNA binding 1.73924929536227 bayes_pls_golite062009
S100 beta binding 1.55177531533958 bayes_pls_golite062009
peptidase activity 1.42397628411744 bayes_pls_golite062009
calcium ion binding 1.40919295397643 bayes_pls_golite062009
structural molecule activity 1.26857768455914 bayes_pls_golite062009
transcription repressor activity 1.24311821191924 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 1.15266823079004 bayes_pls_golite062009
receptor binding 0.857448001471136 bayes_pls_golite062009
endopeptidase activity 0.833336205861396 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.787740261079819 bayes_pls_golite062009
kinase activity 0.782396352346639 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.654002071540024 bayes_pls_golite062009
signal transducer activity 0.509427879516256 bayes_pls_golite062009
molecular transducer activity 0.509427879516256 bayes_pls_golite062009
hydrolase activity 0.275235036575339 bayes_pls_golite062009
structural constituent of muscle 0.23313435855689 bayes_pls_golite062009
transporter activity 0.228493905359086 bayes_pls_golite062009
transmembrane transporter activity 0.0112696370882266 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle