| Protein: | PARD6B |
| Organism: | Homo sapiens |
| Length: | 372 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PARD6B.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-65 | [1..372] | [1..372] |
|
|
4.0E-65 | [1..372] | [1..371] |
|
|
2.0E-63 | [1..372] | [1..377] |
|
|
9.0E-62 | [1..372] | [195..564] |
|
|
1.0E-60 | [1..355] | [1..360] |
|
|
2.0E-59 | [1..372] | [1..370] |
|
|
2.0E-56 | [11..372] | [2..364] |
|
|
9.0E-55 | [1..372] | [1..380] |
|
Region A: Residues: [1-95] |
1 11 21 31 41 51
| | | | | |
1 MNRSHRHGAG SGCLGTMEVK SKFGAEFRRF SLERSKPGKF EEFYGLLQHV HKIPNVDVLV 60
61 GYADIHGDLL PINNDDNYHK AVSTANPLLR IFIQK
|
| Detection Method: |  |
| Confidence: | 9.522879 |
| Match: | 1wmhB |
| Description: | Crystal structure of a PB1 domain complex of Protein kinase c iota and Par6 alpha |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.24212855645397 | bayes_pls_golite062009 |
| phospholipase binding | 1.34684798434912 | bayes_pls_golite062009 |
| protein binding | 1.04550817342273 | bayes_pls_golite062009 |
| signal transducer activity | 0.397569963508051 | bayes_pls_golite062009 |
| molecular transducer activity | 0.397569963508051 | bayes_pls_golite062009 |
|
Region A: Residues: [96-258] |
1 11 21 31 41 51
| | | | | |
1 KEEADYSAFG TDTLIKKKNV LTNVLRPDNH RKKPHIVISM PQDFRPVSSI IDVDILPETH 60
61 RRVRLYKYGT EKPLGFYIRD GSSVRVTPHG LEKVPGIFIS RLVPGGLAQS TGLLAVNDEV 120
121 LEVNGIEVSG KSLDQVTDMM IANSRNLIIT VRPANQRNNV VRN
|
| Detection Method: | |
| Confidence: | 22.30103 |
| Match: | 1nf3C |
| Description: | GTPase-binding domain of the cell polarity protein par6 (Par-6B) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 3.2595117613307 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.48224018205024 | bayes_pls_golite062009 |
| protein binding | 2.35875654816667 | bayes_pls_golite062009 |
| PDZ domain binding | 1.4161955255054 | bayes_pls_golite062009 |
| actin binding | 1.28302718651984 | bayes_pls_golite062009 |
| transporter activity | 0.782216866213126 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.699604120098573 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.434921764966531 | bayes_pls_golite062009 |
| transcription regulator activity | 0.387065538161985 | bayes_pls_golite062009 |
| protein domain specific binding | 0.30840185305841 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.250590541549843 | bayes_pls_golite062009 |
| signal transducer activity | 0.211809989510755 | bayes_pls_golite062009 |
| molecular transducer activity | 0.211809989510755 | bayes_pls_golite062009 |
| receptor binding | 0.00333430733556384 | bayes_pls_golite062009 |
|
Region A: Residues: [259-372] |
1 11 21 31 41 51
| | | | | |
1 SRTSGSSGQS TDNSLLGYPQ QIEPSFEPED EDSEEDDIII EDNGVPQQIP KAVPNTESLE 60
61 SLTQIELSFE SGQNGFIPSN EVSLAAIASS SNTEFETHAP DQKLLEEDGT IITL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
