| Protein: | gi|108707484, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 675 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|108707484, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
520.0 | [0..1] | [664..1] |
|
Region A: Residues: [1-369] |
1 11 21 31 41 51
| | | | | |
1 MAAYEPKNIL ITGAAGFIAS HVANRLVRNY PHYKIVVLDK LDYCSSLSNL NPSRPSPNFK 60
61 FVKGDIASAD LVNYLLTTES IDTIMHFAAQ THVDNSFGNS FEFTKNNIYG THVLLEACKV 120
121 TGQIRRFIHV STDEVYGETD EDAVVGNHEA SQLLPTNPYS ATKAGAEMLV MAYGRSYGLP 180
181 VITTRGNNVY GPNQFPEKLI PKFILLAMRG LPLPIHGDGS NVRSYLYCED VAEAFEVVLH 240
241 KGEVGHVYNI GTVKERRVID VAKDICKLFG LDTEKVIRFV ENRPFNDQRY FLDDQKLKKL 300
301 GWAERTLWEE GLKKTIEWYT NNPDYWGDVA GALLPHPRML MTPGVERHNW TDEIKSLSTS 360
361 PDEAKESST
|
| Detection Method: |  |
| Confidence: | 97.69897 |
| Match: | 1g1aA |
| Description: | dTDP-glucose 4,6-dehydratase (RmlB) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| UDP-glucose 4-epimerase activity | 2.13934644118967 | bayes_pls_golite062009 |
| catalytic activity | 1.79741889688267 | bayes_pls_golite062009 |
| steroid dehydrogenase activity | 1.75109362865449 | bayes_pls_golite062009 |
| steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1.55012034958204 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on CH-OH group of donors | 1.03956654822048 | bayes_pls_golite062009 |
| nucleic acid binding | 0.868888700854563 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 0.82673050487418 | bayes_pls_golite062009 |
| DNA binding | 0.790382977752475 | bayes_pls_golite062009 |
| binding | 0.784517759335365 | bayes_pls_golite062009 |
| transcription regulator activity | 0.613310508772122 | bayes_pls_golite062009 |
| transcription factor activity | 0.11102650759187 | bayes_pls_golite062009 |
|
Region A: Residues: [370-675] |
1 11 21 31 41 51
| | | | | |
1 AVPAATAKST SSAPQKASYK FLIYGRTGWI GGLLGKICEK QGIPYEYGKG RLEERSQLLQ 60
61 DIRNVKPTHV FNAAGVTGRP NVDWCETHKQ DTIRTNVVGT LNLADVCREQ GLLMINYATG 120
121 CIFEYDAKHP EGSGIGFKEE DKPNFTGSYY SKTKAMVEEL LQEYDNVCTL RVRMPISSDL 180
181 SNPRNFITKI ARYDKVVNIP NSMTILDELL PISIEMAKRD CRGIWNFTNP GVVSHNEILE 240
241 MYKKYLNPDF KWTNFTLEEQ AKVIVAPRSN NEMDASKLKS EFPELLSIKD SLVKYVFEPN 300
301 RKVPAN
|
| Detection Method: | |
| Confidence: | 44.69897 |
| Match: | 2c59A |
| Description: | gdp-mannose-3', 5' -epimerase (arabidopsis thaliana), with gdp-alpha-d-mannose and gdp-beta-l-galactose bound in the active site. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| UDP-glucose 4-epimerase activity | 2.13934644118967 | bayes_pls_golite062009 |
| catalytic activity | 1.79741889688267 | bayes_pls_golite062009 |
| steroid dehydrogenase activity | 1.75109362865449 | bayes_pls_golite062009 |
| steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1.55012034958204 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on CH-OH group of donors | 1.03956654822048 | bayes_pls_golite062009 |
| nucleic acid binding | 0.868888700854563 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 0.82673050487418 | bayes_pls_golite062009 |
| DNA binding | 0.790382977752475 | bayes_pls_golite062009 |
| binding | 0.784517759335365 | bayes_pls_golite062009 |
| transcription regulator activity | 0.613310508772122 | bayes_pls_golite062009 |
| transcription factor activity | 0.11102650759187 | bayes_pls_golite062009 |
