| Protein: | VHL |
| Organism: | Homo sapiens |
| Length: | 213 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VHL.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-96 | [1..213] | [1..213] |
|
|
3.0E-82 | [1..212] | [1..212] |
|
|
2.0E-77 | [52..213] | [1..162] |
|
|
3.0E-76 | [38..213] | [6..179] |
|
|
8.0E-76 | [49..211] | [24..186] |
|
|
2.0E-74 | [38..213] | [6..179] |
|
Region A: Residues: [1-59] |
1 11 21 31 41 51
| | | | | |
1 MPRRAENWDE AEVGAEEAGV EEYGPEEDGG EESGAEESGP EESGPEELGA EEEMEAGRP
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [60-213] |
1 11 21 31 41 51
| | | | | |
1 RPVLRSVNSR EPSQVIFCNR SPRVVLPVWL NFDGEPQPYP TLPPGTGRRI HSYRGHLWLF 60
61 RDAGTHDGLL VNQTELFVPS LNVDGQPIFA NITLPVYTLK ERCLQVVRSL VKPENYRRLD 120
121 IVRSLYEDLE DHPNVQKDLE RLTQERIAHQ RMGD
|
| Detection Method: | |
| Confidence: | 79.0 |
| Match: | 1lqbC |
| Description: | VHL |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 3.41909857804058 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 3.22022352763801 | bayes_pls_golite062009 |
| binding | 2.41295334316774 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 2.3720830747925 | bayes_pls_golite062009 |
| protein binding | 2.1782543635871 | bayes_pls_golite062009 |
| transcription factor binding | 2.06418606532911 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 1.0718313791207 | bayes_pls_golite062009 |
| catalytic activity | 0.334765053110546 | bayes_pls_golite062009 |
