| Protein: | TRIM2, TRMT2B |
| Organism: | Homo sapiens |
| Length: | 744 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRIM2, TRMT2B.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-91 | [286..741] | [626..1089] |
|
|
1.0E-89 | [254..743] | [604..1101] |
|
|
2.0E-89 | [213..743] | [902..1440] |
|
|
8.0E-89 | [286..742] | [623..1051] |
|
|
6.0E-88 | [227..741] | [921..1443] |
|
Region A: Residues: [1-120] |
1 11 21 31 41 51
| | | | | |
1 MASEGTNIPS PVVRQIDKQF LICSICLERY KNPKVLPCLH TFCERCLQNY IPAHSLTLSC 60
61 PVCRQTSILP EKGVAALQNN FFITNLMDVL QRTPGSNAEE SSILETVTAV AAGKPLSCPN 120
121
|
| Detection Method: |  |
| Confidence: | 4.045757 |
| Match: | 2cklB |
| Description: | No description for 2cklB was found. |
|
Region A: Residues: [121-231] |
1 11 21 31 41 51
| | | | | |
1 HDGNVMEFYC QSCETAMCRE CTEGEHAEHP TVPLKDVVEQ HKASLQVQLD AVNKRLPEID 60
61 SALQFISEII HQLTNQKASI VDDIHSTFDE LQKTLNVRKS VLLMELEVNY G
|
| Detection Method: | |
| Confidence: | 2.54 |
| Match: | 2djaA |
| Description: | No description for 2djaA was found. |
| Term | Confidence | Notes |
| binding | 1.40795253804896 | bayes_pls_golite062009 |
| protein binding | 1.25958462602675 | bayes_pls_golite062009 |
|
Region A: Residues: [232-302] |
1 11 21 31 41 51
| | | | | |
1 LKHKVLQSQL DTLLQGQESI KSCSNFTAQA LNHGTETEVL LVKKQMSEKL NELADQDFPL 60
61 HPRENDQLDF I
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [303-744] |
1 11 21 31 41 51
| | | | | |
1 VETEGLKKSI HNLGTILTTN AVASETVATG EGLRQTIIGQ PMSVTITTKD KDGELCKTGN 60
61 AYLTAELSTP DGSVADGEIL DNKNGTYEFL YTVQKEGDFT LSLRLYDQHI RGSPFKLKVI 120
121 RSADVSPTTE GVKRRVKSPG SGHVKQKAVK RPASMYSTGK RKENPIEDDL IFRVGTKGRN 180
181 KGEFTNLQGV AASTNGKILI ADSNNQCVQI FSNDGQFKSR FGIRGRSPGQ LQRPTGVAVH 240
241 PSGDIIIADY DNKWVSIFSS DGKFKTKIGS GKLMGPKGVS VDRNGHIIVV DNKACCVFIF 300
301 QPNGKIVTRF GSRGNGDRQF AGPHFAAVNS NNEIIITDFH NHSVKVFNQE GEFMLKFGSN 360
361 GEGNGQFNAP TGVAVDSNGN IIVADWGNSR IQVFDGSGSF LSYINTSADP LYGPQGLALT 420
421 SDGHVVVADS GNHCFKVYRY LQ
|
| Detection Method: | |
| Confidence: | 34.09691 |
| Match: | 1nr0A |
| Description: | Actin interacting protein 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.34904600386994 | bayes_pls_golite062009 |
| protein binding | 1.24173112731149 | bayes_pls_golite062009 |
