| Protein: | gi|29735974 |
| Organism: | Homo sapiens |
| Length: | 128 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29735974.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-52 | [1..126] | [288..411] |
|
|
3.0E-48 | [2..128] | [272..398] |
|
|
8.0E-48 | [1..127] | [187..313] |
|
|
3.0E-47 | [1..125] | [50..172] |
|
|
5.0E-47 | [1..127] | [136..262] |
|
|
2.0E-46 | [1..127] | [61..185] |
|
Region A: Residues: [1-128] |
1 11 21 31 41 51
| | | | | |
1 MTGGKAGKDS GKAKTKAVSR CQRAGLQFPV GRIHLHLKSR TTNHGRVGAT AAVYSAAILK 60
61 YLTAEVLELA GNASKDLKVK RSTTGHLQLA IRGDEELDSL IKATIAGGGV IPHIHKSLTG 120
121 KKGQQKTV
|
| Detection Method: |  |
| Confidence: | 46.522879 |
| Match: | 1f66C |
| Description: | Histone H2A |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| general RNA polymerase II transcription factor activity | 4.57339366278729 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.71983173426562 | bayes_pls_golite062009 |
| binding | 3.27510691458843 | bayes_pls_golite062009 |
| DNA binding | 2.84801656088633 | bayes_pls_golite062009 |
| nucleic acid binding | 2.73664032839239 | bayes_pls_golite062009 |
| transcription regulator activity | 2.30478015157761 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.21819833304707 | bayes_pls_golite062009 |
| protein binding | 1.07873333188144 | bayes_pls_golite062009 |
| centromeric DNA binding | 1.03586371237592 | bayes_pls_golite062009 |
| transcription factor activity | 1.01889555697279 | bayes_pls_golite062009 |
| transcription initiation factor activity | 0.725138319268162 | bayes_pls_golite062009 |
| transferase activity | 0.424228486183795 | bayes_pls_golite062009 |
| histone binding | 0.218942897869955 | bayes_pls_golite062009 |
| transcription factor binding | 0.20278000165075 | bayes_pls_golite062009 |
| transcription activator activity | 0.16305156761639 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.0427278296123499 | bayes_pls_golite062009 |
