| Protein: | gi|119596761, gi... |
| Organism: | Homo sapiens |
| Length: | 833 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|119596761, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..833] | [13..845] |
|
|
0.0 | [1..833] | [1..854] |
|
|
0.0 | [1..833] | [194..1046] |
|
|
0.0 | [1..814] | [1..825] |
|
|
0.0 | [1..833] | [1..839] |
|
|
0.0 | [1..833] | [17..855] |
|
Region A: Residues: [1-201] |
1 11 21 31 41 51
| | | | | |
1 MKGDTRHLNG EEDAGGREDS ILVNGACSDQ SSDSPPILEA IRTPEIRGRR SSSRLSKREV 60
61 SSLLSYTQDL TGDGDGEDGD GSDTPVMPKL FRETRTRSES PAVRTRNNNS VSSRERHRPS 120
121 PRSTRGRQGR NHVDESPVEF PATRSLRRRA TASAGTPWPS PPSSYLTIDL TDDTEDTHGT 180
181 PQSSSTPYAR LAQDSQQGGM E
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [202-391] |
1 11 21 31 41 51
| | | | | |
1 SPQVEADSGD GDSSEYQDGK EFGIGDLVWG KIKGFSWWPA MVVSWKATSK RQAMSGMRWV 60
61 QWFGDGKFSE VSADKLVALG LFSQHFNLAT FNKLVSYRKA MYHALEKARV RAGKTFPSSP 120
121 GDSLEDQLKP MLEWAHGGFK PTGIEGLKPN NTQPENKTRR RTADDSATSD YCPAPKRLKT 180
181 NCYNNGKDRG
|
| Detection Method: | |
| Confidence: | 28.0 |
| Match: | 1khcA |
| Description: | DNA methyltransferase DNMT3B |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates | 7.32955324136098 | bayes_pls_golite062009 |
| DNA (cytosine-5-)-methyltransferase activity | 5.05440120599055 | bayes_pls_golite062009 |
| DNA-methyltransferase activity | 4.57248514274229 | bayes_pls_golite062009 |
| methylated histone residue binding | 3.99360930536438 | bayes_pls_golite062009 |
| histone methyltransferase activity | 3.58146193288239 | bayes_pls_golite062009 |
| transcription regulator activity | 3.34067645460735 | bayes_pls_golite062009 |
| unmethylated CpG binding | 3.31276815221906 | bayes_pls_golite062009 |
| transcription repressor activity | 3.21000367413295 | bayes_pls_golite062009 |
| protein methyltransferase activity | 3.0892691305178 | bayes_pls_golite062009 |
| binding | 3.03932294945523 | bayes_pls_golite062009 |
| protein binding | 2.81959915474598 | bayes_pls_golite062009 |
| histone binding | 2.53075587257882 | bayes_pls_golite062009 |
| protein-lysine N-methyltransferase activity | 2.42481282100188 | bayes_pls_golite062009 |
| histone-lysine N-methyltransferase activity | 2.42481282100188 | bayes_pls_golite062009 |
| lysine N-methyltransferase activity | 2.42481282100188 | bayes_pls_golite062009 |
| nucleic acid binding | 2.39870293911569 | bayes_pls_golite062009 |
| DNA binding | 2.38812251097879 | bayes_pls_golite062009 |
| N-methyltransferase activity | 2.35081504375623 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 2.18489564426455 | bayes_pls_golite062009 |
| transcription corepressor activity | 1.65392797012899 | bayes_pls_golite062009 |
| transcription factor binding | 1.49481919243505 | bayes_pls_golite062009 |
| methyltransferase activity | 1.45012620929102 | bayes_pls_golite062009 |
| transcription factor activity | 1.41108699101741 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 1.37282797213354 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.36802409360413 | bayes_pls_golite062009 |
| chromatin binding | 0.8915883636553 | bayes_pls_golite062009 |
| histone methyltransferase activity (H3-K36 specific) | 0.668498662418847 | bayes_pls_golite062009 |
| retinoid X receptor binding | 0.56323697625529 | bayes_pls_golite062009 |
| retinoic acid receptor binding | 0.52209845652926 | bayes_pls_golite062009 |
| transcription activator activity | 0.262486595331603 | bayes_pls_golite062009 |
| histone methyltransferase activity (H4-K20 specific) | 0.227288548958153 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.141502107934206 | bayes_pls_golite062009 |
|
Region A: Residues: [392-722] |
1 11 21 31 41 51
| | | | | |
1 DEDQSREQMA SDVANNKSSL EDGCLSCGRK NPVSFHPLFE GGLCQTCRDR FLELFYMYDD 60
61 DGYQSYCTVC CEGRELLLCS NTSCCRCFCV ECLEVLVGTG TAAEAKLQEP WSCYMCLPQR 120
121 CHGVLRRRKD WNVRLQAFFT SDTGLEYEAP KLYPAIPAAR RRPIRVLSLF DGIATGYLVL 180
181 KELGIKVGKY VASEVCEESI AVGTVKHEGN IKYVNDVRNI TKKNIEEWGP FDLVIGGSPC 240
241 NDLSNVNPAR KGLYEGTGRL FFEFYHLLNY SRPKEGDDRP FFWMFENVVA MKVGDKRDIS 300
301 RFLECNPVMI DAIKVSAAHR ARYFWGNLPG M
|
| Detection Method: | |
| Confidence: | 78.69897 |
| Match: | 2pv0B |
| Description: | No description for 2pv0B was found. |
|
Region A: Residues: [723-833] |
1 11 21 31 41 51
| | | | | |
1 NRPVIASKND KLELQDCLEY NRIAKLKKVQ TITTKSNSIK QGKNQLFPVV MNGKEDVLWC 60
61 TELERIFGFP VHYTDVSNMG RGARQKLLGR SWSVPVIRHL FAPLKDYFAC E
|
| Detection Method: | |
| Confidence: | 60.154902 |
| Match: | 1dctA |
| Description: | DNA methylase HaeIII |
Matching Structure (courtesy of the PDB): |
|
