| Protein: | TIGD1 |
| Organism: | Homo sapiens |
| Length: | 591 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIGD1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..591] | [1..591] |
|
|
0.0 | [1..591] | [1..591] |
|
|
0.0 | [23..591] | [1..569] |
|
|
0.0 | [1..591] | [1..591] |
|
|
0.0 | [7..538] | [2..517] |
|
|
0.0 | [7..538] | [2..516] |
|
Region A: Residues: [1-157] |
1 11 21 31 41 51
| | | | | |
1 MASKCSSERK SRTSLTLNQK LEMIKLSEEG MSKAEIGRRL GLLRQTVSQV VNAKEKFLKE 60
61 VKSATPMNTR MIRKRNSLIA DMEKVLVVWI EDQTSRNIPL SQSLIQNKAL TLFNSMKAER 120
121 GVEAAEEKFE ASRGWFMRFK ERSHFHNIKA QGEAASA
|
| Detection Method: |  |
| Confidence: | 21.69897 |
| Match: | 1hlvA |
| Description: | DNA-binding domain of centromere binding protein B (CENP-B) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.71840976776163 | bayes_pls_golite062009 |
| DNA binding | 2.61711182194361 | bayes_pls_golite062009 |
| binding | 2.59102816487173 | bayes_pls_golite062009 |
| nucleic acid binding | 2.3237599869447 | bayes_pls_golite062009 |
| transcription factor activity | 2.18905180070231 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.69885241317809 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.35613772918036 | bayes_pls_golite062009 |
| protein binding | 0.853351196918381 | bayes_pls_golite062009 |
| transcription activator activity | 0.67940033960016 | bayes_pls_golite062009 |
| transcription repressor activity | 0.67392957114349 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.44172618015361 | bayes_pls_golite062009 |
| transcription factor binding | 0.22865859991459 | bayes_pls_golite062009 |
| chromatin binding | 0.203837749053719 | bayes_pls_golite062009 |
|
Region A: Residues: [158-419] |
1 11 21 31 41 51
| | | | | |
1 DVEAAASYPE ALAKIIDEGG YTKQQIFNVD ETAFYWKKMP SRTFIAREEK SVPGFKASKD 60
61 RLTLLLGANA AGDFKLKPML IYHSENPRAL KNYTKSTLPV LYKWNSKARM TAHLFTAWFT 120
121 EYFKPTVETY CSEKKIPFKI LLLIDNAPSH PRALMEIYEE INVIFMPANT TSILQPMDQG 180
181 VISTFKSYYL RNTFHKALAA MDSDVSDGSG QSKLKTFWKG FTILDAIKNI RDSWEEVKLS 240
241 TLTGVWKKLI PTLIDDYEGF KT
|
| Detection Method: | |
| Confidence: | 1.52 |
| Match: | 2f7tA |
| Description: | No description for 2f7tA was found. |
|
Region A: Residues: [420-591] |
1 11 21 31 41 51
| | | | | |
1 SVEEVSADVV EIAKELELEV EPEDVTELLQ SHDKTLTDEE LFLMDAQRKW FLEMESTPGE 60
61 DAVNIVEMTT KDLEYYINLV DKAAAGFERI DSNFERSSTV GKMLSNSIAC YREIFHERKS 120
121 QLMRKASPMS YFRKLPQPPQ PSAATTLTSQ QPSTSRQDPP PAKRVRLTEG SD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
