| Protein: | SAF1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 637 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAF1.
| Description | E-value | Query Range |
Subject Range |
|
|
517.0 | [0..1] | [637..6] |
|
Region A: Residues: [1-267] |
1 11 21 31 41 51
| | | | | |
1 MSEVESREKE PDAGLSPDIV QATLPFLSSD DIKNLSQTNK YYNTLLDFDH SKILWHELFH 60
61 KAFGTLKTND EPFQGRNSAE FKTCTETILR EAFPTLSWQE VYQLRAYDAK FYSWGYLKHG 120
121 RLGYTASSNN ELVATSLNGP SPRFKYGVNT PTEVPWFNSR TTSRTSNFTP SEDPLSAIKK 180
181 DGDEIIAQVS SGGFSFQILT ESGNLYSSGS TFSGGLKGPG PSGSQHDYNP FREMIHNMER 240
241 SYPRITSRSN GSTVNTTGTF SGRRMSG
|
| Detection Method: |  |
| Confidence: | 1.05 |
| Match: | 1a12A |
| Description: | Regulator of chromosome condensation RCC1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 5.01485857731423 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 4.93236158049022 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 4.21249056267986 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 3.40166727602209 | bayes_pls_golite062009 |
| ligase activity | 1.84832719690603 | bayes_pls_golite062009 |
| binding | 0.720895345637233 | bayes_pls_golite062009 |
| catalytic activity | 0.277477143337075 | bayes_pls_golite062009 |
|
Region A: Residues: [268-637] |
1 11 21 31 41 51
| | | | | |
1 SHPSTAYEPG NATTAQHITI DSGGAPAASP GGSHSGVPRT TMPSMGPHEN IYSQIEMLER 60
61 SANKAVPGNN HIRRMFARNS FPLYSGRDEN LGSFNDIQFV AVSSGRSHFL AMDTDNNIYS 120
121 WDSTESDQGV KIEFANLPSR ATNPILKIAS GWNFNCCYIY KVGLVAWKER DAIQKGESFA 180
181 FAKYEIVPNT NDVNGDSRIV DFACLQDNCV FFINNNGDKL WKYHNGLNQI VDLNIVGKLC 240
241 KINACFASLV LFTDTHCYTL KVTNGDVDKD SLTELDINEN VISVASGDYH TVALTERGHL 300
301 YSWGIESQDC GCLGLGPSEK IVNELHIGNW EGQRNIRVVK PTKIELPEDY ICVSVTAGGW 360
361 QTGALIIKKH
|
| Detection Method: | |
| Confidence: | 60.69897 |
| Match: | 1a12A |
| Description: | Regulator of chromosome condensation RCC1 |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 5.074598603744 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 4.98706956258248 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 4.24569482624066 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 3.41677849112717 | bayes_pls_golite062009 |
| ligase activity | 1.85186470582778 | bayes_pls_golite062009 |
| binding | 0.714930161612764 | bayes_pls_golite062009 |
| catalytic activity | 0.261970921089142 | bayes_pls_golite062009 |
