| Protein: | YPR204W |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1032 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPR204W.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1032] | [228..1224] |
|
|
0.0 | [1..1032] | [686..1681] |
|
Region A: Residues: [1-392] |
1 11 21 31 41 51
| | | | | |
1 MADTPSVAVQ APPGYGKTEL FHLPLIALAS KGDVKYVSFL FVPYTVLLAN CMIRLGRCGC 60
61 LNVAPVRNFI EEGCDGVTDL YVGIYDDLAS TNFTDRIAAW ENIVECTFRT NNVKLGYLIV 120
121 DEFHNFETEV YRQSQFGGIT NLDFDAFEKA IFLSGTAPEA VADAALQRIG LTGLAKKSMD 180
181 INELKRSEDL SRGLSSYPTR MFNLIKEKSE VPLGHVHKIW KKVESQPEEA LKLLLALFEI 240
241 EPESKAIVVA STTNEVEELA CSWRKYFRVV WIHGKLGAAE KVSRTKEFVT DGSMRVLIGT 300
301 KLVTEGIDIK QLMMVIMLDN RLNIIELIQG VGRLRDGGLC YLLSRKNSWA ARNRKGELPP 360
361 IKEGCITEQV REFYGLESKK GKKGQHVGCC GS
|
| Detection Method: |  |
| Confidence: | 146.69897 |
| Match: | 1fuuA_ |
| Description: | Initiation factor 4a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.36550713198424 | bayes_pls_golite062009 |
| catalytic activity | 0.234613562021476 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.166100211611062 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.159702441149605 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.149170905385965 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.147838751017739 | bayes_pls_golite062009 |
| hydrolase activity | 0.0436758932827116 | bayes_pls_golite062009 |
|
Region A: Residues: [393-738] |
1 11 21 31 41 51
| | | | | |
1 RTDLSADTVE LIERMDRLAE KQATASMSIV ALPSSFQESN SSDRCRKYCS SDEDSNTCIH 60
61 GSANASTNAT TNSSTNATTT ASTNVRTSAT TTASINVRTS ATTTESTNSS TNATTTASTN 120
121 VRTSATTTAS INVRTSATTT ESTNSNTSAT TTESTDSNTS ATTTESTNSS TNATTTASIN 180
181 VRTSATTTES TNSNTNATTT ESTNSSTNAT TTEGTNSNTS ATTTASTNSS TNATTTESTN 240
241 ASAKEDANKD GNAEDNRFHP VTDINKESYK RKGSQMVLLE RKKLKAQFPN TSENMNVLQF 300
301 LGFRSDEIKH LFLYGIDVYF CPEGVFTQYG LCKGCQKMFE LCVCWA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [739-1032] |
1 11 21 31 41 51
| | | | | |
1 GQKVSYRRMA WEALAVERML RNDEEYKEYL EDIEPYHGDP VGYLKYFSVK RGEIYSQIQR 60
61 NYAWYLAITR RRETISVLDS TRGKQGSQVF RMSGRQIKEL YYKVWSNLRE SKTEVLQYFL 120
121 NWDEKKCREE WEAKDDTVFV EALEKVGVFQ RLRSMTSAGL QGPQYVKLQF SRHHRQLRSR 180
181 YELSLGMHLR DQLALGVTPS KVPHWTAFLS MLIGLFCNKT FRQKLEYLLE QISEVWLLPH 240
241 WLDLANVEVL AADNTRVPLY MLMVAVHKEL DSDDVPDGRF DILLCRDSSR EVGE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
