| Protein: | SEC8 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1065 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SEC8.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1065] | [1..1065] |
|
|
0.0 | [54..1012] | [24..948] |
|
|
0.0 | [54..1012] | [24..947] |
|
|
0.0 | [54..1012] | [24..948] |
|
|
0.0 | [5..976] | [61..1017] |
|
|
0.0 | [4..976] | [21..1025] |
|
|
0.0 | [56..996] | [28..951] |
|
Region A: Residues: [1-320] |
1 11 21 31 41 51
| | | | | |
1 MDYLKPAQKG RRRGLSINSL SETQQSAMNS SLDHLQNDLN RINLQWNRIL SDNTNPLELA 60
61 LAFLDDTSVG LGHRYEEFNQ LKSQIGSHLQ DVVNEHSQVF NTNVASYGKA VSSIMQAQEQ 120
121 TLNLKNCLKE ANEKITTDKG SLQELNDNNL KYTKMIDVLV NIEELLQIPE KIEENIRKEN 180
181 FHQVQILLER GFILMNNKSL KTVEILKPIN QQLELQEHLL FNNLIEEIHD IMYSKSNKTN 240
241 FTRVTNNDIF KIISISHNGF TSLENYLYNI VNIDIMEHSK TINKNLEQFI HDQSLNKGNI 300
301 MLQENAATQA PLAPSRNQEN
|
| Detection Method: |  |
| Confidence: | 12.69897 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [321-547] |
1 11 21 31 41 51
| | | | | |
1 EGFNRIGFLL KTINNINKLP VAFNIITERA KEEIHNIIVK STESIRSKHP SLLKMATSLK 60
61 NDNHFGLPVQ DILSIILREC FWEIFLKLLY AIQCHRAIFE MSNILQPTSS AKPAFKFNKI 120
121 WGKLLDEIEL LLVRYINDPE LISSNNGSIK PINGATNNAP TLPKRKNPKI FSLEYNIEDN 180
181 SSVKDQAFEL KALLKDIFPG FSVSSNMDLD SIYVKDESFE QDEPLVP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [548-677] |
1 11 21 31 41 51
| | | | | |
1 PSVFNMKVIL DPFLLFTQST STIVPSVLTQ NTISSLTFFD DYMNKSFLPK IQMTMDYLFT 60
61 VEVESNNPYA LELSDENHNI FKTALDFQRL FYNLLNVFNT ANTFREKISY CILDLLNHFY 120
121 NYYLGLFNSL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.918 | N/A | N/A | a.24.14 | FAT domain of focal adhesion kinase |
|
Region A: Residues: [678-744] |
1 11 21 31 41 51
| | | | | |
1 IGTSDRHLTR KIITAWLQNG ILMDQEQKIL NGDETLFHEE SIELFKEIPH FYQAGKGLSK 60
61 SDLFNNL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [745-1013] |
1 11 21 31 41 51
| | | | | |
1 TLDTILQFSA SVLWILNWLP GLKKAINIDE VSQEPMLDAD RLRSSWTFSE SMDLNYSNPS 60
61 SSPNSLGNLK ILLDDKASKK FDETIDGFKT LKFKLITILR FNIRALCIYD IGSFFQNTKI 120
121 WNMDVGSIEL DQNIASLISE LRRTESKLKQ QLPEKEKNSI FIGLDIVNNY ALIKGAKSIK 180
181 VLNHNGIKKM LRNVNVLQHA YRNLSSEPSK INMNVTMNFY SLCGSSEAEL FEYIKDNELP 240
241 HCSVEDLKTI LRLQFSEEMH RQLKRQSTS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1014-1065] |
1 11 21 31 41 51
| | | | | |
1 STKGSIKPSN KRYTEALEKL SNLEKEQSKE GARTKIGKLK SKLNAVHTAN EK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
